Protein–RNA interactions for Protein: Q91XZ2

Pcdhb8, Protocadherin beta-8, mousemouse

Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb8Q91XZ2 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdhb8Q91XZ2 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdhb8Q91XZ2 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdhb8Q91XZ2 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdhb8Q91XZ2 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC12.36□□□□□ -0.43
Pcdhb8Q91XZ2 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdhb8Q91XZ2 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC12.36□□□□□ -0.43
Pcdhb8Q91XZ2 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdhb8Q91XZ2 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdhb8Q91XZ2 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdhb8Q91XZ2 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdhb8Q91XZ2 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdhb8Q91XZ2 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdhb8Q91XZ2 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdhb8Q91XZ2 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdhb8Q91XZ2 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdhb8Q91XZ2 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC12.36□□□□□ -0.43
Pcdhb8Q91XZ2 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC12.36□□□□□ -0.43
Pcdhb8Q91XZ2 Gm12363-201ENSMUST00000122250 668 ntBASIC12.36□□□□□ -0.43
Pcdhb8Q91XZ2 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC12.36□□□□□ -0.43
Pcdhb8Q91XZ2 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC12.36□□□□□ -0.43
Pcdhb8Q91XZ2 Gm4768-201ENSMUST00000206199 686 ntBASIC12.36□□□□□ -0.43
Pcdhb8Q91XZ2 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Pcdhb8Q91XZ2 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdhb8Q91XZ2 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdhb8Q91XZ2 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdhb8Q91XZ2 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdhb8Q91XZ2 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdhb8Q91XZ2 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC12.36□□□□□ -0.43
Pcdhb8Q91XZ2 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdhb8Q91XZ2 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdhb8Q91XZ2 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdhb8Q91XZ2 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdhb8Q91XZ2 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdhb8Q91XZ2 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC12.36□□□□□ -0.43
Pcdhb8Q91XZ2 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdhb8Q91XZ2 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC12.36□□□□□ -0.43
Pcdhb8Q91XZ2 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC12.35□□□□□ -0.43
Pcdhb8Q91XZ2 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdhb8Q91XZ2 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdhb8Q91XZ2 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdhb8Q91XZ2 Gm44775-201ENSMUST00000207266 1456 ntBASIC12.35□□□□□ -0.43
Pcdhb8Q91XZ2 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdhb8Q91XZ2 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdhb8Q91XZ2 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdhb8Q91XZ2 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Pcdhb8Q91XZ2 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC12.35□□□□□ -0.43
Pcdhb8Q91XZ2 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC12.35□□□□□ -0.43
Pcdhb8Q91XZ2 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdhb8Q91XZ2 Gm7029-201ENSMUST00000173226 450 ntBASIC12.35□□□□□ -0.43
Pcdhb8Q91XZ2 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Pcdhb8Q91XZ2 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
Pcdhb8Q91XZ2 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdhb8Q91XZ2 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdhb8Q91XZ2 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdhb8Q91XZ2 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdhb8Q91XZ2 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdhb8Q91XZ2 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdhb8Q91XZ2 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC12.35□□□□□ -0.43
Pcdhb8Q91XZ2 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdhb8Q91XZ2 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdhb8Q91XZ2 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdhb8Q91XZ2 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC12.35□□□□□ -0.43
Pcdhb8Q91XZ2 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdhb8Q91XZ2 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdhb8Q91XZ2 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdhb8Q91XZ2 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC12.35□□□□□ -0.43
Pcdhb8Q91XZ2 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdhb8Q91XZ2 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdhb8Q91XZ2 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdhb8Q91XZ2 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Pcdhb8Q91XZ2 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdhb8Q91XZ2 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdhb8Q91XZ2 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
Pcdhb8Q91XZ2 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Pcdhb8Q91XZ2 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC12.34□□□□□ -0.43
Pcdhb8Q91XZ2 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdhb8Q91XZ2 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdhb8Q91XZ2 Zscan30-202ENSMUST00000224144 1458 ntBASIC12.34□□□□□ -0.43
Pcdhb8Q91XZ2 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdhb8Q91XZ2 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdhb8Q91XZ2 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdhb8Q91XZ2 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdhb8Q91XZ2 Gm6992-201ENSMUST00000217973 1607 ntBASIC12.34□□□□□ -0.43
Pcdhb8Q91XZ2 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdhb8Q91XZ2 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdhb8Q91XZ2 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdhb8Q91XZ2 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdhb8Q91XZ2 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Pcdhb8Q91XZ2 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdhb8Q91XZ2 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdhb8Q91XZ2 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Pcdhb8Q91XZ2 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdhb8Q91XZ2 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdhb8Q91XZ2 Gm6652-201ENSMUST00000186414 1070 ntBASIC12.34□□□□□ -0.43
Pcdhb8Q91XZ2 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC12.34□□□□□ -0.43
Pcdhb8Q91XZ2 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC12.34□□□□□ -0.43
Pcdhb8Q91XZ2 Gm32025-201ENSMUST00000217960 307 ntBASIC12.34□□□□□ -0.43
Pcdhb8Q91XZ2 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Pcdhb8Q91XZ2 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 52.4 ms