Protein–RNA interactions for Protein: Q91XY5

Pcdhga3, Protocadherin gamma A3, mousemouse

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga3Q91XY5 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Pcdhga3Q91XY5 Sh3tc1-201ENSMUST00000070203 4549 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Pcdhga3Q91XY5 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC11.29□□□□□ -0.6
Pcdhga3Q91XY5 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Pcdhga3Q91XY5 Gm37014-201ENSMUST00000194723 2253 ntBASIC11.29□□□□□ -0.6
Pcdhga3Q91XY5 Myo16-203ENSMUST00000207477 7169 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Pcdhga3Q91XY5 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Pcdhga3Q91XY5 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Pcdhga3Q91XY5 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Pcdhga3Q91XY5 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC11.29□□□□□ -0.6
Pcdhga3Q91XY5 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC11.29□□□□□ -0.6
Pcdhga3Q91XY5 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Pcdhga3Q91XY5 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Pcdhga3Q91XY5 Gm17435-202ENSMUST00000212699 1998 ntBASIC11.29□□□□□ -0.6
Pcdhga3Q91XY5 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Pcdhga3Q91XY5 Dock6-201ENSMUST00000034728 6467 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Pcdhga3Q91XY5 Plekha5-201ENSMUST00000087622 7382 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Pcdhga3Q91XY5 Gm7104-201ENSMUST00000179741 2532 ntBASIC11.29□□□□□ -0.6
Pcdhga3Q91XY5 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Pcdhga3Q91XY5 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Pcdhga3Q91XY5 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Pcdhga3Q91XY5 Gm11424-201ENSMUST00000121929 829 ntBASIC11.29□□□□□ -0.6
Pcdhga3Q91XY5 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Pcdhga3Q91XY5 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC11.29□□□□□ -0.6
Pcdhga3Q91XY5 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC11.29□□□□□ -0.6
Pcdhga3Q91XY5 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Pcdhga3Q91XY5 Gm27847-201ENSMUST00000183711 107 ntBASIC11.29□□□□□ -0.6
Pcdhga3Q91XY5 Gm27375-201ENSMUST00000183799 107 ntBASIC11.29□□□□□ -0.6
Pcdhga3Q91XY5 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC11.29□□□□□ -0.6
Pcdhga3Q91XY5 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC11.29□□□□□ -0.6
Pcdhga3Q91XY5 Gm44799-201ENSMUST00000207639 1202 ntBASIC11.29□□□□□ -0.6
Pcdhga3Q91XY5 Gm5035-201ENSMUST00000215581 927 ntBASIC11.29□□□□□ -0.6
Pcdhga3Q91XY5 Gm2824-203ENSMUST00000226189 1228 ntBASIC11.29□□□□□ -0.6
Pcdhga3Q91XY5 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Pcdhga3Q91XY5 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Pcdhga3Q91XY5 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Pcdhga3Q91XY5 Nexmif-202ENSMUST00000087879 10891 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Pcdhga3Q91XY5 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC11.29□□□□□ -0.6
Pcdhga3Q91XY5 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Pcdhga3Q91XY5 Cux1-204ENSMUST00000175975 10945 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Pcdhga3Q91XY5 Pafah1b2-201ENSMUST00000172450 6873 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Pcdhga3Q91XY5 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Pcdhga3Q91XY5 Arhgap33-201ENSMUST00000044338 4280 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Pcdhga3Q91XY5 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Pcdhga3Q91XY5 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Pcdhga3Q91XY5 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
Pcdhga3Q91XY5 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC11.29□□□□□ -0.6
Pcdhga3Q91XY5 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC11.29□□□□□ -0.6
Pcdhga3Q91XY5 Gm13050-201ENSMUST00000122149 1345 ntBASIC11.29□□□□□ -0.6
Pcdhga3Q91XY5 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Pcdhga3Q91XY5 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Pcdhga3Q91XY5 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Pcdhga3Q91XY5 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Pcdhga3Q91XY5 Gm19817-201ENSMUST00000199764 2132 ntBASIC11.29□□□□□ -0.6
Pcdhga3Q91XY5 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Pcdhga3Q91XY5 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Pcdhga3Q91XY5 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Pcdhga3Q91XY5 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC11.28□□□□□ -0.6
Pcdhga3Q91XY5 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pcdhga3Q91XY5 Nsd3-206ENSMUST00000142395 10105 ntAPPRIS P2 TSL 5 BASIC11.28□□□□□ -0.6
Pcdhga3Q91XY5 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Pcdhga3Q91XY5 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Pcdhga3Q91XY5 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Pcdhga3Q91XY5 Sugp1-201ENSMUST00000011450 2681 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pcdhga3Q91XY5 Mrvi1-202ENSMUST00000125758 5953 ntAPPRIS ALT2 TSL 2 BASIC11.28□□□□□ -0.6
Pcdhga3Q91XY5 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pcdhga3Q91XY5 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Pcdhga3Q91XY5 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pcdhga3Q91XY5 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pcdhga3Q91XY5 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Pcdhga3Q91XY5 Gm12203-201ENSMUST00000118235 598 ntBASIC11.28□□□□□ -0.6
Pcdhga3Q91XY5 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC11.28□□□□□ -0.6
Pcdhga3Q91XY5 Gm12209-201ENSMUST00000120089 596 ntBASIC11.28□□□□□ -0.6
Pcdhga3Q91XY5 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC11.28□□□□□ -0.6
Pcdhga3Q91XY5 Gm13123-201ENSMUST00000122173 492 ntBASIC11.28□□□□□ -0.6
Pcdhga3Q91XY5 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC11.28□□□□□ -0.6
Pcdhga3Q91XY5 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Pcdhga3Q91XY5 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC11.28□□□□□ -0.6
Pcdhga3Q91XY5 Gm37497-201ENSMUST00000195830 798 ntBASIC11.28□□□□□ -0.6
Pcdhga3Q91XY5 AC134254.1-201ENSMUST00000221362 167 ntBASIC11.28□□□□□ -0.6
Pcdhga3Q91XY5 AC093022.5-201ENSMUST00000226841 1079 ntBASIC11.28□□□□□ -0.6
Pcdhga3Q91XY5 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pcdhga3Q91XY5 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pcdhga3Q91XY5 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC11.28□□□□□ -0.6
Pcdhga3Q91XY5 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Pcdhga3Q91XY5 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pcdhga3Q91XY5 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pcdhga3Q91XY5 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pcdhga3Q91XY5 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pcdhga3Q91XY5 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Pcdhga3Q91XY5 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pcdhga3Q91XY5 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC11.27□□□□□ -0.6
Pcdhga3Q91XY5 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Pcdhga3Q91XY5 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Pcdhga3Q91XY5 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Pcdhga3Q91XY5 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Pcdhga3Q91XY5 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.6
Pcdhga3Q91XY5 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC11.27□□□□□ -0.6
Pcdhga3Q91XY5 Gm37324-201ENSMUST00000194500 4504 ntBASIC11.27□□□□□ -0.6
Pcdhga3Q91XY5 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 68.6 ms