Protein–RNA interactions for Protein: Q91VN6

Ddx41, Probable ATP-dependent RNA helicase DDX41, mousemouse

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx41Q91VN6 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Ddx41Q91VN6 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC14.53□□□□□ -0.08
Ddx41Q91VN6 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ddx41Q91VN6 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ddx41Q91VN6 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ddx41Q91VN6 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ddx41Q91VN6 Pop4-201ENSMUST00000032585 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ddx41Q91VN6 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ddx41Q91VN6 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Ddx41Q91VN6 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
Ddx41Q91VN6 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
Ddx41Q91VN6 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Ddx41Q91VN6 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Ddx41Q91VN6 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Ddx41Q91VN6 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Ddx41Q91VN6 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC14.52□□□□□ -0.08
Ddx41Q91VN6 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Ddx41Q91VN6 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Ddx41Q91VN6 Gm24255-201ENSMUST00000104481 128 ntBASIC14.52□□□□□ -0.09
Ddx41Q91VN6 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Ddx41Q91VN6 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC14.52□□□□□ -0.09
Ddx41Q91VN6 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC14.52□□□□□ -0.09
Ddx41Q91VN6 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC14.52□□□□□ -0.09
Ddx41Q91VN6 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Ddx41Q91VN6 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
Ddx41Q91VN6 Gm4857-201ENSMUST00000192718 785 ntBASIC14.52□□□□□ -0.09
Ddx41Q91VN6 Gm38297-201ENSMUST00000195122 1057 ntBASIC14.52□□□□□ -0.09
Ddx41Q91VN6 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
Ddx41Q91VN6 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC14.52□□□□□ -0.09
Ddx41Q91VN6 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Ddx41Q91VN6 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Ddx41Q91VN6 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Ddx41Q91VN6 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
Ddx41Q91VN6 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
Ddx41Q91VN6 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Ddx41Q91VN6 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Ddx41Q91VN6 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Ddx41Q91VN6 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ddx41Q91VN6 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ddx41Q91VN6 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ddx41Q91VN6 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ddx41Q91VN6 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Ddx41Q91VN6 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Ddx41Q91VN6 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ddx41Q91VN6 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
Ddx41Q91VN6 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC14.51□□□□□ -0.09
Ddx41Q91VN6 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ddx41Q91VN6 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ddx41Q91VN6 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC14.51□□□□□ -0.09
Ddx41Q91VN6 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Ddx41Q91VN6 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Ddx41Q91VN6 Gm8738-201ENSMUST00000172606 329 ntBASIC14.51□□□□□ -0.09
Ddx41Q91VN6 5830487J09Rik-201ENSMUST00000198600 1256 ntTSL 5 BASIC14.51□□□□□ -0.09
Ddx41Q91VN6 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Ddx41Q91VN6 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ddx41Q91VN6 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Ddx41Q91VN6 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ddx41Q91VN6 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Ddx41Q91VN6 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ddx41Q91VN6 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Ddx41Q91VN6 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ddx41Q91VN6 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Ddx41Q91VN6 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ddx41Q91VN6 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ddx41Q91VN6 Gm4780-202ENSMUST00000215200 2644 ntBASIC14.51□□□□□ -0.09
Ddx41Q91VN6 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC14.51□□□□□ -0.09
Ddx41Q91VN6 CT025678.1-201ENSMUST00000214795 2972 ntBASIC14.51□□□□□ -0.09
Ddx41Q91VN6 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ddx41Q91VN6 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ddx41Q91VN6 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Ddx41Q91VN6 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ddx41Q91VN6 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ddx41Q91VN6 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Ddx41Q91VN6 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC14.5□□□□□ -0.09
Ddx41Q91VN6 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC14.5□□□□□ -0.09
Ddx41Q91VN6 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ddx41Q91VN6 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ddx41Q91VN6 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ddx41Q91VN6 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC14.5□□□□□ -0.09
Ddx41Q91VN6 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC14.5□□□□□ -0.09
Ddx41Q91VN6 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC14.5□□□□□ -0.09
Ddx41Q91VN6 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ddx41Q91VN6 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Ddx41Q91VN6 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ddx41Q91VN6 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC14.5□□□□□ -0.09
Ddx41Q91VN6 Gm38157-201ENSMUST00000194178 1698 ntBASIC14.5□□□□□ -0.09
Ddx41Q91VN6 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC14.5□□□□□ -0.09
Ddx41Q91VN6 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ddx41Q91VN6 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ddx41Q91VN6 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Ddx41Q91VN6 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ddx41Q91VN6 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ddx41Q91VN6 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Ddx41Q91VN6 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Ddx41Q91VN6 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC14.5□□□□□ -0.09
Ddx41Q91VN6 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC14.5□□□□□ -0.09
Ddx41Q91VN6 Gm22121-201ENSMUST00000175148 54 ntBASIC14.5□□□□□ -0.09
Ddx41Q91VN6 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC14.5□□□□□ -0.09
Ddx41Q91VN6 Mir7221-201ENSMUST00000184009 72 ntBASIC14.5□□□□□ -0.09
Ddx41Q91VN6 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 675.8 ms