Protein–RNA interactions for Protein: Q8VHR0

Pcdh18, Protocadherin 18, mousemouse

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh18Q8VHR0 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdh18Q8VHR0 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdh18Q8VHR0 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdh18Q8VHR0 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC12.23□□□□□ -0.45
Pcdh18Q8VHR0 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdh18Q8VHR0 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdh18Q8VHR0 Gm3052-202ENSMUST00000188254 2224 ntBASIC12.23□□□□□ -0.45
Pcdh18Q8VHR0 Dpep1-201ENSMUST00000019422 2236 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdh18Q8VHR0 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdh18Q8VHR0 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdh18Q8VHR0 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdh18Q8VHR0 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdh18Q8VHR0 Mylip-202ENSMUST00000222178 1954 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdh18Q8VHR0 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdh18Q8VHR0 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdh18Q8VHR0 Gm26642-201ENSMUST00000180981 2782 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdh18Q8VHR0 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC12.23□□□□□ -0.45
Pcdh18Q8VHR0 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdh18Q8VHR0 Tmem140-201ENSMUST00000074949 2614 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdh18Q8VHR0 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdh18Q8VHR0 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdh18Q8VHR0 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC12.23□□□□□ -0.45
Pcdh18Q8VHR0 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdh18Q8VHR0 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdh18Q8VHR0 Mmd2-201ENSMUST00000037048 3317 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdh18Q8VHR0 Mical1-202ENSMUST00000099934 3292 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdh18Q8VHR0 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Pcdh18Q8VHR0 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdh18Q8VHR0 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
Pcdh18Q8VHR0 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdh18Q8VHR0 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdh18Q8VHR0 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC12.22□□□□□ -0.45
Pcdh18Q8VHR0 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdh18Q8VHR0 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdh18Q8VHR0 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdh18Q8VHR0 Gm21038-201ENSMUST00000222205 1383 ntBASIC12.22□□□□□ -0.45
Pcdh18Q8VHR0 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdh18Q8VHR0 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdh18Q8VHR0 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdh18Q8VHR0 Tax1bp1-201ENSMUST00000080723 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdh18Q8VHR0 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdh18Q8VHR0 Gm16215-201ENSMUST00000161990 637 ntBASIC12.22□□□□□ -0.45
Pcdh18Q8VHR0 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC12.22□□□□□ -0.45
Pcdh18Q8VHR0 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdh18Q8VHR0 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC12.22□□□□□ -0.45
Pcdh18Q8VHR0 Gm5354-201ENSMUST00000182417 973 ntBASIC12.22□□□□□ -0.45
Pcdh18Q8VHR0 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdh18Q8VHR0 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdh18Q8VHR0 Gm42612-201ENSMUST00000197986 623 ntBASIC12.22□□□□□ -0.45
Pcdh18Q8VHR0 Gm43170-201ENSMUST00000199827 612 ntBASIC12.22□□□□□ -0.45
Pcdh18Q8VHR0 Gm42550-201ENSMUST00000201553 960 ntBASIC12.22□□□□□ -0.45
Pcdh18Q8VHR0 Wdyhv1-203ENSMUST00000226889 394 ntBASIC12.22□□□□□ -0.45
Pcdh18Q8VHR0 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdh18Q8VHR0 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdh18Q8VHR0 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdh18Q8VHR0 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdh18Q8VHR0 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdh18Q8VHR0 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdh18Q8VHR0 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdh18Q8VHR0 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdh18Q8VHR0 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdh18Q8VHR0 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdh18Q8VHR0 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdh18Q8VHR0 Gm43045-201ENSMUST00000198725 2095 ntBASIC12.22□□□□□ -0.45
Pcdh18Q8VHR0 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdh18Q8VHR0 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Pcdh18Q8VHR0 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Pcdh18Q8VHR0 Prf1-202ENSMUST00000219375 2474 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Pcdh18Q8VHR0 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Pcdh18Q8VHR0 Gm3365-201ENSMUST00000216296 1480 ntBASIC12.21□□□□□ -0.45
Pcdh18Q8VHR0 Olfr658-202ENSMUST00000210641 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Pcdh18Q8VHR0 Olfr658-201ENSMUST00000089296 2912 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Pcdh18Q8VHR0 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Pcdh18Q8VHR0 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Pcdh18Q8VHR0 Slc6a18-201ENSMUST00000022105 2839 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Pcdh18Q8VHR0 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Pcdh18Q8VHR0 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Pcdh18Q8VHR0 Gm26872-201ENSMUST00000180862 2261 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Pcdh18Q8VHR0 Ttc25-201ENSMUST00000006976 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Pcdh18Q8VHR0 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Pcdh18Q8VHR0 Gm22189-201ENSMUST00000103822 86 ntBASIC12.21□□□□□ -0.45
Pcdh18Q8VHR0 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Pcdh18Q8VHR0 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC12.21□□□□□ -0.45
Pcdh18Q8VHR0 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC12.21□□□□□ -0.45
Pcdh18Q8VHR0 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
Pcdh18Q8VHR0 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Pcdh18Q8VHR0 Gm35960-201ENSMUST00000202712 767 ntBASIC12.21□□□□□ -0.45
Pcdh18Q8VHR0 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC12.21□□□□□ -0.45
Pcdh18Q8VHR0 Gm7730-201ENSMUST00000212486 454 ntBASIC12.21□□□□□ -0.45
Pcdh18Q8VHR0 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC12.21□□□□□ -0.45
Pcdh18Q8VHR0 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Pcdh18Q8VHR0 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Pcdh18Q8VHR0 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC12.21□□□□□ -0.45
Pcdh18Q8VHR0 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC12.21□□□□□ -0.45
Pcdh18Q8VHR0 Plekhg2-201ENSMUST00000094644 4623 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Pcdh18Q8VHR0 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Pcdh18Q8VHR0 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Pcdh18Q8VHR0 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Pcdh18Q8VHR0 Pabpc4-203ENSMUST00000106241 3050 ntAPPRIS P5 TSL 5 BASIC12.21□□□□□ -0.46
Pcdh18Q8VHR0 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 54 ms