Protein–RNA interactions for Protein: Q8VC31

Ccdc9, Coiled-coil domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 543 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9Q8VC31 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC15.18■□□□□ 0.02
Ccdc9Q8VC31 Crebrf-203ENSMUST00000142539 2674 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Ccdc9Q8VC31 Extl3-201ENSMUST00000022550 5977 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Ccdc9Q8VC31 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Ccdc9Q8VC31 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC15.18■□□□□ 0.02
Ccdc9Q8VC31 Spg20-203ENSMUST00000117341 2957 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Ccdc9Q8VC31 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Ccdc9Q8VC31 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC15.18■□□□□ 0.02
Ccdc9Q8VC31 Gm24513-201ENSMUST00000174964 138 ntBASIC15.18■□□□□ 0.02
Ccdc9Q8VC31 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Ccdc9Q8VC31 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ccdc9Q8VC31 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Ccdc9Q8VC31 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC15.18■□□□□ 0.02
Ccdc9Q8VC31 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ccdc9Q8VC31 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ccdc9Q8VC31 Myom3-201ENSMUST00000105854 5575 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Ccdc9Q8VC31 Mrrf-201ENSMUST00000028250 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ccdc9Q8VC31 Chek1-202ENSMUST00000172702 3797 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ccdc9Q8VC31 Als2cl-203ENSMUST00000130386 5056 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ccdc9Q8VC31 Sell-201ENSMUST00000027871 2199 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ccdc9Q8VC31 Tbc1d14-202ENSMUST00000124036 2765 ntTSL 5 BASIC15.18■□□□□ 0.02
Ccdc9Q8VC31 Tmcc1-210ENSMUST00000204353 2851 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ccdc9Q8VC31 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Ccdc9Q8VC31 Olfr1113-202ENSMUST00000215611 1949 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Ccdc9Q8VC31 Olfr742-203ENSMUST00000217437 2244 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Ccdc9Q8VC31 Sox8-201ENSMUST00000025003 3000 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ccdc9Q8VC31 Trub2-201ENSMUST00000048044 3408 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ccdc9Q8VC31 Ptpn11-201ENSMUST00000054547 5535 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ccdc9Q8VC31 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Ccdc9Q8VC31 Sez6l-206ENSMUST00000212758 2664 ntTSL 5 BASIC15.17■□□□□ 0.02
Ccdc9Q8VC31 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Ccdc9Q8VC31 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC15.17■□□□□ 0.02
Ccdc9Q8VC31 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Ccdc9Q8VC31 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ccdc9Q8VC31 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Ccdc9Q8VC31 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ccdc9Q8VC31 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ccdc9Q8VC31 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC15.17■□□□□ 0.02
Ccdc9Q8VC31 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC15.17■□□□□ 0.02
Ccdc9Q8VC31 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC15.17■□□□□ 0.02
Ccdc9Q8VC31 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC15.17■□□□□ 0.02
Ccdc9Q8VC31 Gm27397-201ENSMUST00000184997 107 ntBASIC15.17■□□□□ 0.02
Ccdc9Q8VC31 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC15.17■□□□□ 0.02
Ccdc9Q8VC31 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC15.17■□□□□ 0.02
Ccdc9Q8VC31 Ighv8-14-201ENSMUST00000196781 358 ntBASIC15.17■□□□□ 0.02
Ccdc9Q8VC31 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC15.17■□□□□ 0.02
Ccdc9Q8VC31 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC15.17■□□□□ 0.02
Ccdc9Q8VC31 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Ccdc9Q8VC31 AC132104.2-201ENSMUST00000215011 266 ntBASIC15.17■□□□□ 0.02
Ccdc9Q8VC31 AC166341.4-201ENSMUST00000220625 123 ntBASIC15.17■□□□□ 0.02
Ccdc9Q8VC31 AC131187.1-201ENSMUST00000224567 809 ntBASIC15.17■□□□□ 0.02
Ccdc9Q8VC31 AC155252.2-201ENSMUST00000226946 680 ntBASIC15.17■□□□□ 0.02
Ccdc9Q8VC31 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC15.17■□□□□ 0.02
Ccdc9Q8VC31 Clasp1-216ENSMUST00000189738 5373 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Ccdc9Q8VC31 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC15.17■□□□□ 0.02
Ccdc9Q8VC31 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ccdc9Q8VC31 Cobl-202ENSMUST00000109650 5271 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Ccdc9Q8VC31 Chrng-201ENSMUST00000027470 2780 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ccdc9Q8VC31 Mtap-201ENSMUST00000058030 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ccdc9Q8VC31 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ccdc9Q8VC31 Sema4a-201ENSMUST00000029700 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ccdc9Q8VC31 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Ccdc9Q8VC31 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Ccdc9Q8VC31 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Ccdc9Q8VC31 Tm9sf1-202ENSMUST00000120041 2164 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Ccdc9Q8VC31 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ccdc9Q8VC31 L3mbtl1-201ENSMUST00000035751 2724 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Ccdc9Q8VC31 Arhgef2-207ENSMUST00000175903 3356 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Ccdc9Q8VC31 Myh10-203ENSMUST00000102611 7791 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ccdc9Q8VC31 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ccdc9Q8VC31 Parp9-203ENSMUST00000114878 3548 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ccdc9Q8VC31 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ccdc9Q8VC31 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ccdc9Q8VC31 Lgsn-201ENSMUST00000062560 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ccdc9Q8VC31 Frmd4a-202ENSMUST00000091497 6208 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ccdc9Q8VC31 Exd1-201ENSMUST00000060009 6042 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ccdc9Q8VC31 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Ccdc9Q8VC31 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Ccdc9Q8VC31 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Ccdc9Q8VC31 Gm4995-201ENSMUST00000117247 432 ntBASIC15.16■□□□□ 0.02
Ccdc9Q8VC31 Gm11745-201ENSMUST00000121669 448 ntBASIC15.16■□□□□ 0.02
Ccdc9Q8VC31 Gm11594-201ENSMUST00000122313 162 ntBASIC15.16■□□□□ 0.02
Ccdc9Q8VC31 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Ccdc9Q8VC31 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Ccdc9Q8VC31 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ccdc9Q8VC31 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ccdc9Q8VC31 Gm38225-201ENSMUST00000194001 393 ntBASIC15.16■□□□□ 0.02
Ccdc9Q8VC31 Gm43073-201ENSMUST00000198200 1189 ntBASIC15.16■□□□□ 0.02
Ccdc9Q8VC31 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Ccdc9Q8VC31 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ccdc9Q8VC31 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ccdc9Q8VC31 Rbbp5-202ENSMUST00000187505 1977 ntTSL 5 BASIC15.16■□□□□ 0.02
Ccdc9Q8VC31 Gm45449-201ENSMUST00000211485 1960 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Ccdc9Q8VC31 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ccdc9Q8VC31 Tmem8b-209ENSMUST00000167153 4101 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ccdc9Q8VC31 Zbtb42-201ENSMUST00000169593 3478 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
Ccdc9Q8VC31 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC15.16■□□□□ 0.02
Ccdc9Q8VC31 Gm8320-201ENSMUST00000177584 1762 ntBASIC15.16■□□□□ 0.02
Ccdc9Q8VC31 Gm8303-201ENSMUST00000178371 1762 ntBASIC15.16■□□□□ 0.02
Ccdc9Q8VC31 Gm8331-201ENSMUST00000178433 1762 ntBASIC15.16■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 88 ms