Protein–RNA interactions for Protein: Q8R5L3

Vps39, Vam6/Vps39-like protein, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps39Q8R5L3 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC12.66□□□□□ -0.38
Vps39Q8R5L3 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC12.66□□□□□ -0.38
Vps39Q8R5L3 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC12.66□□□□□ -0.38
Vps39Q8R5L3 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC12.66□□□□□ -0.38
Vps39Q8R5L3 Gm9630-201ENSMUST00000178304 885 ntBASIC12.66□□□□□ -0.38
Vps39Q8R5L3 Gm6652-201ENSMUST00000186414 1070 ntBASIC12.66□□□□□ -0.38
Vps39Q8R5L3 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC12.66□□□□□ -0.38
Vps39Q8R5L3 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC12.66□□□□□ -0.38
Vps39Q8R5L3 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC12.66□□□□□ -0.38
Vps39Q8R5L3 Gm10146-201ENSMUST00000072739 309 ntBASIC12.66□□□□□ -0.38
Vps39Q8R5L3 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Vps39Q8R5L3 Maml3-201ENSMUST00000118075 5450 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Vps39Q8R5L3 Gm44292-201ENSMUST00000205194 2364 ntBASIC12.66□□□□□ -0.38
Vps39Q8R5L3 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Vps39Q8R5L3 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Vps39Q8R5L3 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Vps39Q8R5L3 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Vps39Q8R5L3 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Vps39Q8R5L3 AC117194.1-201ENSMUST00000224847 3002 ntBASIC12.66□□□□□ -0.38
Vps39Q8R5L3 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC12.66□□□□□ -0.38
Vps39Q8R5L3 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Vps39Q8R5L3 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Vps39Q8R5L3 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Vps39Q8R5L3 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Vps39Q8R5L3 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Vps39Q8R5L3 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Vps39Q8R5L3 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC12.65□□□□□ -0.38
Vps39Q8R5L3 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Vps39Q8R5L3 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Vps39Q8R5L3 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Vps39Q8R5L3 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Vps39Q8R5L3 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Vps39Q8R5L3 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC12.65□□□□□ -0.38
Vps39Q8R5L3 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Vps39Q8R5L3 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Vps39Q8R5L3 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Vps39Q8R5L3 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC12.65□□□□□ -0.38
Vps39Q8R5L3 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Vps39Q8R5L3 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Vps39Q8R5L3 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Vps39Q8R5L3 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC12.65□□□□□ -0.38
Vps39Q8R5L3 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Vps39Q8R5L3 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC12.65□□□□□ -0.38
Vps39Q8R5L3 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Vps39Q8R5L3 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Vps39Q8R5L3 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Vps39Q8R5L3 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Vps39Q8R5L3 Gm4768-201ENSMUST00000206199 686 ntBASIC12.65□□□□□ -0.38
Vps39Q8R5L3 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC12.65□□□□□ -0.38
Vps39Q8R5L3 Gm45484-201ENSMUST00000210310 1141 ntBASIC12.65□□□□□ -0.38
Vps39Q8R5L3 Gm10371-202ENSMUST00000228010 1081 ntBASIC12.65□□□□□ -0.38
Vps39Q8R5L3 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Vps39Q8R5L3 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Vps39Q8R5L3 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Vps39Q8R5L3 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Vps39Q8R5L3 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC12.65□□□□□ -0.38
Vps39Q8R5L3 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Vps39Q8R5L3 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC12.65□□□□□ -0.38
Vps39Q8R5L3 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Vps39Q8R5L3 Acacb-201ENSMUST00000031583 8482 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Vps39Q8R5L3 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Vps39Q8R5L3 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Vps39Q8R5L3 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Vps39Q8R5L3 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Vps39Q8R5L3 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Vps39Q8R5L3 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Vps39Q8R5L3 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Vps39Q8R5L3 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Vps39Q8R5L3 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Vps39Q8R5L3 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Vps39Q8R5L3 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Vps39Q8R5L3 Gm15897-201ENSMUST00000117770 1486 ntBASIC12.65□□□□□ -0.38
Vps39Q8R5L3 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
Vps39Q8R5L3 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC12.65□□□□□ -0.39
Vps39Q8R5L3 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.39
Vps39Q8R5L3 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Vps39Q8R5L3 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Vps39Q8R5L3 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Vps39Q8R5L3 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Vps39Q8R5L3 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Vps39Q8R5L3 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Vps39Q8R5L3 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Vps39Q8R5L3 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Vps39Q8R5L3 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Vps39Q8R5L3 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Vps39Q8R5L3 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Vps39Q8R5L3 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Vps39Q8R5L3 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Vps39Q8R5L3 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Vps39Q8R5L3 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Vps39Q8R5L3 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Vps39Q8R5L3 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Vps39Q8R5L3 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC12.64□□□□□ -0.39
Vps39Q8R5L3 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Vps39Q8R5L3 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC12.64□□□□□ -0.39
Vps39Q8R5L3 Gm22331-201ENSMUST00000158066 136 ntBASIC12.64□□□□□ -0.39
Vps39Q8R5L3 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Vps39Q8R5L3 Gm8652-201ENSMUST00000181363 964 ntBASIC12.64□□□□□ -0.39
Vps39Q8R5L3 Gm5896-201ENSMUST00000189662 1024 ntBASIC12.64□□□□□ -0.39
Vps39Q8R5L3 Gm9794-201ENSMUST00000202370 423 ntBASIC12.64□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 90.2 ms