Protein–RNA interactions for Protein: Q8R4U6

Top1mt, DNA topoisomerase I, mitochondrial, mousemouse

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Top1mtQ8R4U6 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Top1mtQ8R4U6 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Top1mtQ8R4U6 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Top1mtQ8R4U6 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
Top1mtQ8R4U6 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Top1mtQ8R4U6 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Top1mtQ8R4U6 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Top1mtQ8R4U6 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Top1mtQ8R4U6 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Top1mtQ8R4U6 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Top1mtQ8R4U6 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Top1mtQ8R4U6 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Top1mtQ8R4U6 Gm24231-201ENSMUST00000104315 133 ntBASIC15.09■□□□□ 0.01
Top1mtQ8R4U6 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC15.09■□□□□ 0.01
Top1mtQ8R4U6 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Top1mtQ8R4U6 Mir1982-201ENSMUST00000157368 74 ntBASIC15.09■□□□□ 0.01
Top1mtQ8R4U6 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Top1mtQ8R4U6 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Top1mtQ8R4U6 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC15.09■□□□□ 0.01
Top1mtQ8R4U6 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Top1mtQ8R4U6 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Top1mtQ8R4U6 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Top1mtQ8R4U6 Gm3287-205ENSMUST00000228893 1332 ntBASIC15.09■□□□□ 0.01
Top1mtQ8R4U6 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Top1mtQ8R4U6 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Top1mtQ8R4U6 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC15.09■□□□□ 0.01
Top1mtQ8R4U6 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Top1mtQ8R4U6 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC15.09■□□□□ 0.01
Top1mtQ8R4U6 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Top1mtQ8R4U6 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Top1mtQ8R4U6 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Top1mtQ8R4U6 Gm18227-201ENSMUST00000211082 1468 ntBASIC15.08■□□□□ 0.01
Top1mtQ8R4U6 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0.01
Top1mtQ8R4U6 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Top1mtQ8R4U6 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Top1mtQ8R4U6 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
Top1mtQ8R4U6 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
Top1mtQ8R4U6 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC15.08■□□□□ 0
Top1mtQ8R4U6 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC15.08■□□□□ 0
Top1mtQ8R4U6 Daam2-202ENSMUST00000224595 1926 ntBASIC15.08■□□□□ 0
Top1mtQ8R4U6 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Top1mtQ8R4U6 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Top1mtQ8R4U6 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC15.08■□□□□ 0
Top1mtQ8R4U6 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC15.08■□□□□ 0
Top1mtQ8R4U6 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Top1mtQ8R4U6 Gm9431-201ENSMUST00000119765 1051 ntBASIC15.08■□□□□ 0
Top1mtQ8R4U6 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC15.08■□□□□ 0
Top1mtQ8R4U6 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC15.08■□□□□ 0
Top1mtQ8R4U6 Gm9630-201ENSMUST00000178304 885 ntBASIC15.08■□□□□ 0
Top1mtQ8R4U6 Gm43433-201ENSMUST00000196573 481 ntBASIC15.08■□□□□ 0
Top1mtQ8R4U6 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC15.08■□□□□ 0
Top1mtQ8R4U6 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Top1mtQ8R4U6 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Top1mtQ8R4U6 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC15.08■□□□□ 0
Top1mtQ8R4U6 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC15.08■□□□□ 0
Top1mtQ8R4U6 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Top1mtQ8R4U6 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC15.08■□□□□ 0
Top1mtQ8R4U6 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC15.08■□□□□ 0
Top1mtQ8R4U6 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
Top1mtQ8R4U6 Gm5780-201ENSMUST00000217774 1834 ntBASIC15.08■□□□□ 0
Top1mtQ8R4U6 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC15.08■□□□□ 0
Top1mtQ8R4U6 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC15.08■□□□□ 0
Top1mtQ8R4U6 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
Top1mtQ8R4U6 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC15.08■□□□□ 0
Top1mtQ8R4U6 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Top1mtQ8R4U6 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Top1mtQ8R4U6 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Top1mtQ8R4U6 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Top1mtQ8R4U6 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC15.07■□□□□ 0
Top1mtQ8R4U6 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC15.07■□□□□ 0
Top1mtQ8R4U6 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC15.07■□□□□ 0
Top1mtQ8R4U6 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC15.07■□□□□ 0
Top1mtQ8R4U6 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC15.07■□□□□ 0
Top1mtQ8R4U6 Gm16379-201ENSMUST00000161469 348 ntBASIC15.07■□□□□ 0
Top1mtQ8R4U6 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC15.07■□□□□ 0
Top1mtQ8R4U6 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
Top1mtQ8R4U6 Gm8762-201ENSMUST00000193486 339 ntBASIC15.07■□□□□ 0
Top1mtQ8R4U6 Gm44124-201ENSMUST00000204159 472 ntBASIC15.07■□□□□ 0
Top1mtQ8R4U6 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC15.07■□□□□ 0
Top1mtQ8R4U6 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC15.07■□□□□ 0
Top1mtQ8R4U6 AC140451.2-201ENSMUST00000228030 664 ntBASIC15.07■□□□□ 0
Top1mtQ8R4U6 AC108416.1-202ENSMUST00000228927 1201 ntBASIC15.07■□□□□ 0
Top1mtQ8R4U6 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Top1mtQ8R4U6 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Top1mtQ8R4U6 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Top1mtQ8R4U6 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Top1mtQ8R4U6 Gm22058-201ENSMUST00000083393 310 ntBASIC15.07■□□□□ 0
Top1mtQ8R4U6 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Top1mtQ8R4U6 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Top1mtQ8R4U6 Gm4735-201ENSMUST00000138679 1302 ntBASIC15.07■□□□□ 0
Top1mtQ8R4U6 Gm5855-201ENSMUST00000200240 1305 ntBASIC15.07■□□□□ 0
Top1mtQ8R4U6 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC15.07■□□□□ 0
Top1mtQ8R4U6 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Top1mtQ8R4U6 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Top1mtQ8R4U6 Gm7789-202ENSMUST00000211273 1400 ntBASIC15.07■□□□□ 0
Top1mtQ8R4U6 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Top1mtQ8R4U6 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Top1mtQ8R4U6 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC15.07■□□□□ 0
Top1mtQ8R4U6 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
Top1mtQ8R4U6 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 108.1 ms