Protein–RNA interactions for Protein: Q8R1T1

Chmp7, Charged multivesicular body protein 7, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp7Q8R1T1 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Chmp7Q8R1T1 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Chmp7Q8R1T1 Net1-206ENSMUST00000222504 447 ntTSL 3 BASIC16.12■□□□□ 0.17
Chmp7Q8R1T1 AC163667.3-201ENSMUST00000225774 222 ntBASIC16.12■□□□□ 0.17
Chmp7Q8R1T1 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Chmp7Q8R1T1 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Chmp7Q8R1T1 Mrpl18-201ENSMUST00000079121 1219 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Chmp7Q8R1T1 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Chmp7Q8R1T1 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Chmp7Q8R1T1 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Chmp7Q8R1T1 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Chmp7Q8R1T1 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC16.12■□□□□ 0.17
Chmp7Q8R1T1 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Chmp7Q8R1T1 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Chmp7Q8R1T1 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Chmp7Q8R1T1 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Chmp7Q8R1T1 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Chmp7Q8R1T1 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Chmp7Q8R1T1 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Chmp7Q8R1T1 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Chmp7Q8R1T1 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Chmp7Q8R1T1 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Chmp7Q8R1T1 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC16.11■□□□□ 0.17
Chmp7Q8R1T1 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Chmp7Q8R1T1 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Chmp7Q8R1T1 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Chmp7Q8R1T1 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Chmp7Q8R1T1 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC16.11■□□□□ 0.17
Chmp7Q8R1T1 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Chmp7Q8R1T1 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Chmp7Q8R1T1 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Chmp7Q8R1T1 Gm18304-201ENSMUST00000189162 546 ntBASIC16.11■□□□□ 0.17
Chmp7Q8R1T1 Gm29707-202ENSMUST00000198744 659 ntTSL 3 BASIC16.11■□□□□ 0.17
Chmp7Q8R1T1 AY036118-201ENSMUST00000200021 923 ntBASIC16.11■□□□□ 0.17
Chmp7Q8R1T1 Cotl1-203ENSMUST00000211873 826 ntTSL 5 BASIC16.11■□□□□ 0.17
Chmp7Q8R1T1 Ntan1-201ENSMUST00000023362 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Chmp7Q8R1T1 Ly6g5c-201ENSMUST00000037849 509 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Chmp7Q8R1T1 Rpl10a-201ENSMUST00000042334 829 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Chmp7Q8R1T1 Krtap19-1-201ENSMUST00000081334 493 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Chmp7Q8R1T1 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Chmp7Q8R1T1 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Chmp7Q8R1T1 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Chmp7Q8R1T1 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Chmp7Q8R1T1 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Chmp7Q8R1T1 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Chmp7Q8R1T1 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Chmp7Q8R1T1 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Chmp7Q8R1T1 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Chmp7Q8R1T1 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Chmp7Q8R1T1 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Chmp7Q8R1T1 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Chmp7Q8R1T1 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Chmp7Q8R1T1 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Chmp7Q8R1T1 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Chmp7Q8R1T1 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Chmp7Q8R1T1 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC16.1■□□□□ 0.17
Chmp7Q8R1T1 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Chmp7Q8R1T1 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Chmp7Q8R1T1 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Chmp7Q8R1T1 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Chmp7Q8R1T1 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
Chmp7Q8R1T1 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Chmp7Q8R1T1 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Chmp7Q8R1T1 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Chmp7Q8R1T1 Cstl1-201ENSMUST00000109952 629 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Chmp7Q8R1T1 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Chmp7Q8R1T1 Gm14249-201ENSMUST00000156239 1017 ntTSL 5 BASIC16.1■□□□□ 0.17
Chmp7Q8R1T1 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC16.1■□□□□ 0.17
Chmp7Q8R1T1 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC16.1■□□□□ 0.17
Chmp7Q8R1T1 Gm43701-201ENSMUST00000202047 391 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Chmp7Q8R1T1 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC16.1■□□□□ 0.17
Chmp7Q8R1T1 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC16.1■□□□□ 0.17
Chmp7Q8R1T1 AC159205.5-202ENSMUST00000224849 386 ntBASIC16.1■□□□□ 0.17
Chmp7Q8R1T1 Ppie-201ENSMUST00000030404 1188 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Chmp7Q8R1T1 Gm9996-201ENSMUST00000070359 913 ntBASIC16.1■□□□□ 0.17
Chmp7Q8R1T1 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Chmp7Q8R1T1 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Chmp7Q8R1T1 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Chmp7Q8R1T1 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Chmp7Q8R1T1 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Chmp7Q8R1T1 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Chmp7Q8R1T1 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Chmp7Q8R1T1 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC16.1■□□□□ 0.17
Chmp7Q8R1T1 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Chmp7Q8R1T1 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Chmp7Q8R1T1 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Chmp7Q8R1T1 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Chmp7Q8R1T1 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Chmp7Q8R1T1 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Chmp7Q8R1T1 Dync1i2-202ENSMUST00000100028 2097 ntTSL 5 BASIC16.09■□□□□ 0.17
Chmp7Q8R1T1 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Chmp7Q8R1T1 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Chmp7Q8R1T1 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Chmp7Q8R1T1 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC16.09■□□□□ 0.17
Chmp7Q8R1T1 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Chmp7Q8R1T1 Pmp22-203ENSMUST00000108701 723 ntAPPRIS P1 TSL 3 BASIC16.09■□□□□ 0.17
Chmp7Q8R1T1 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Chmp7Q8R1T1 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Chmp7Q8R1T1 Gm44100-201ENSMUST00000204329 436 ntBASIC16.09■□□□□ 0.17
Chmp7Q8R1T1 D530033B14Rik-202ENSMUST00000206282 216 ntBASIC16.09■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 53.1 ms