Protein–RNA interactions for Protein: Q8R1N4

Nudcd3, NudC domain-containing protein 3, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nudcd3Q8R1N4 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Nudcd3Q8R1N4 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Nudcd3Q8R1N4 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nudcd3Q8R1N4 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nudcd3Q8R1N4 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nudcd3Q8R1N4 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nudcd3Q8R1N4 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Nudcd3Q8R1N4 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nudcd3Q8R1N4 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Nudcd3Q8R1N4 Sema6d-207ENSMUST00000103240 4372 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nudcd3Q8R1N4 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Nudcd3Q8R1N4 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nudcd3Q8R1N4 Apbb2-216ENSMUST00000162366 6540 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Nudcd3Q8R1N4 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Nudcd3Q8R1N4 Gcn1l1-201ENSMUST00000064454 8555 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nudcd3Q8R1N4 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nudcd3Q8R1N4 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nudcd3Q8R1N4 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nudcd3Q8R1N4 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nudcd3Q8R1N4 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nudcd3Q8R1N4 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nudcd3Q8R1N4 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nudcd3Q8R1N4 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nudcd3Q8R1N4 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nudcd3Q8R1N4 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nudcd3Q8R1N4 Olfr1428-203ENSMUST00000214103 2127 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Nudcd3Q8R1N4 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nudcd3Q8R1N4 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nudcd3Q8R1N4 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nudcd3Q8R1N4 Pitpnm2-201ENSMUST00000086123 6620 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nudcd3Q8R1N4 Rims3-202ENSMUST00000106283 6437 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Nudcd3Q8R1N4 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nudcd3Q8R1N4 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
Nudcd3Q8R1N4 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nudcd3Q8R1N4 Mir7684-201ENSMUST00000183858 60 ntBASIC12.61□□□□□ -0.39
Nudcd3Q8R1N4 Gm27390-201ENSMUST00000184516 176 ntBASIC12.61□□□□□ -0.39
Nudcd3Q8R1N4 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC12.61□□□□□ -0.39
Nudcd3Q8R1N4 Gm44064-201ENSMUST00000204964 1087 ntBASIC12.61□□□□□ -0.39
Nudcd3Q8R1N4 Gm45195-201ENSMUST00000205597 1008 ntBASIC12.61□□□□□ -0.39
Nudcd3Q8R1N4 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC12.61□□□□□ -0.39
Nudcd3Q8R1N4 AC132863.2-201ENSMUST00000226643 799 ntBASIC12.61□□□□□ -0.39
Nudcd3Q8R1N4 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nudcd3Q8R1N4 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nudcd3Q8R1N4 Ntrk2-202ENSMUST00000109838 6846 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Nudcd3Q8R1N4 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nudcd3Q8R1N4 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Nudcd3Q8R1N4 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Nudcd3Q8R1N4 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Nudcd3Q8R1N4 Aff3-203ENSMUST00000095027 5857 ntAPPRIS P2 TSL 5 BASIC12.61□□□□□ -0.39
Nudcd3Q8R1N4 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nudcd3Q8R1N4 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Nudcd3Q8R1N4 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Nudcd3Q8R1N4 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
Nudcd3Q8R1N4 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Nudcd3Q8R1N4 Gm43677-201ENSMUST00000198098 2378 ntBASIC12.61□□□□□ -0.39
Nudcd3Q8R1N4 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nudcd3Q8R1N4 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Nudcd3Q8R1N4 Clpb-211ENSMUST00000209579 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nudcd3Q8R1N4 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nudcd3Q8R1N4 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nudcd3Q8R1N4 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nudcd3Q8R1N4 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nudcd3Q8R1N4 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nudcd3Q8R1N4 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nudcd3Q8R1N4 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nudcd3Q8R1N4 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nudcd3Q8R1N4 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nudcd3Q8R1N4 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Nudcd3Q8R1N4 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nudcd3Q8R1N4 Gm22189-201ENSMUST00000103822 86 ntBASIC12.6□□□□□ -0.39
Nudcd3Q8R1N4 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Nudcd3Q8R1N4 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nudcd3Q8R1N4 Gm14719-201ENSMUST00000121891 340 ntBASIC12.6□□□□□ -0.39
Nudcd3Q8R1N4 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC12.6□□□□□ -0.39
Nudcd3Q8R1N4 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Nudcd3Q8R1N4 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Nudcd3Q8R1N4 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nudcd3Q8R1N4 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Nudcd3Q8R1N4 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Nudcd3Q8R1N4 Mir8102-201ENSMUST00000184148 139 ntBASIC12.6□□□□□ -0.39
Nudcd3Q8R1N4 Gm44397-201ENSMUST00000195950 113 ntBASIC12.6□□□□□ -0.39
Nudcd3Q8R1N4 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC12.6□□□□□ -0.39
Nudcd3Q8R1N4 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC12.6□□□□□ -0.39
Nudcd3Q8R1N4 Gm6983-201ENSMUST00000214912 628 ntBASIC12.6□□□□□ -0.39
Nudcd3Q8R1N4 Gm16372-201ENSMUST00000073088 450 ntBASIC12.6□□□□□ -0.39
Nudcd3Q8R1N4 Mir339-201ENSMUST00000083659 96 ntBASIC12.6□□□□□ -0.39
Nudcd3Q8R1N4 Rab3c-202ENSMUST00000223922 2398 ntBASIC12.6□□□□□ -0.39
Nudcd3Q8R1N4 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Nudcd3Q8R1N4 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Nudcd3Q8R1N4 Crybg2-201ENSMUST00000121391 4761 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nudcd3Q8R1N4 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nudcd3Q8R1N4 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nudcd3Q8R1N4 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Nudcd3Q8R1N4 Slc25a36-202ENSMUST00000085206 5227 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Nudcd3Q8R1N4 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Nudcd3Q8R1N4 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Nudcd3Q8R1N4 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Nudcd3Q8R1N4 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Nudcd3Q8R1N4 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC12.59□□□□□ -0.39
Nudcd3Q8R1N4 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms