Protein–RNA interactions for Protein: Q8CIK8

Rfwd3, E3 ubiquitin-protein ligase RFWD3, mousemouse

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfwd3Q8CIK8 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Rfwd3Q8CIK8 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Rfwd3Q8CIK8 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Rfwd3Q8CIK8 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Rfwd3Q8CIK8 Gm43417-201ENSMUST00000201586 5207 ntBASIC11.91□□□□□ -0.5
Rfwd3Q8CIK8 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Rfwd3Q8CIK8 Gm20633-201ENSMUST00000176742 2831 ntBASIC11.91□□□□□ -0.5
Rfwd3Q8CIK8 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Rfwd3Q8CIK8 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Rfwd3Q8CIK8 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Rfwd3Q8CIK8 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Rfwd3Q8CIK8 Gm25261-201ENSMUST00000157416 134 ntBASIC11.91□□□□□ -0.5
Rfwd3Q8CIK8 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Rfwd3Q8CIK8 Gm5370-201ENSMUST00000187187 574 ntBASIC11.91□□□□□ -0.5
Rfwd3Q8CIK8 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC11.91□□□□□ -0.5
Rfwd3Q8CIK8 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC11.91□□□□□ -0.5
Rfwd3Q8CIK8 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC11.91□□□□□ -0.5
Rfwd3Q8CIK8 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Rfwd3Q8CIK8 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Rfwd3Q8CIK8 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Rfwd3Q8CIK8 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC11.91□□□□□ -0.5
Rfwd3Q8CIK8 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC11.91□□□□□ -0.5
Rfwd3Q8CIK8 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Rfwd3Q8CIK8 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Rfwd3Q8CIK8 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Rfwd3Q8CIK8 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Rfwd3Q8CIK8 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Rfwd3Q8CIK8 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Rfwd3Q8CIK8 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC11.91□□□□□ -0.5
Rfwd3Q8CIK8 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Rfwd3Q8CIK8 Fn1-214ENSMUST00000188894 8043 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Rfwd3Q8CIK8 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Rfwd3Q8CIK8 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Rfwd3Q8CIK8 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Rfwd3Q8CIK8 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Rfwd3Q8CIK8 Gm44775-201ENSMUST00000207266 1456 ntBASIC11.9□□□□□ -0.5
Rfwd3Q8CIK8 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Rfwd3Q8CIK8 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Rfwd3Q8CIK8 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Rfwd3Q8CIK8 Gm37437-201ENSMUST00000194451 1937 ntBASIC11.9□□□□□ -0.5
Rfwd3Q8CIK8 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Rfwd3Q8CIK8 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Rfwd3Q8CIK8 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Rfwd3Q8CIK8 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Rfwd3Q8CIK8 Gm5187-201ENSMUST00000117317 991 ntBASIC11.9□□□□□ -0.5
Rfwd3Q8CIK8 Trav4d-2-201ENSMUST00000120914 335 ntBASIC11.9□□□□□ -0.5
Rfwd3Q8CIK8 Gm13813-201ENSMUST00000120998 787 ntBASIC11.9□□□□□ -0.5
Rfwd3Q8CIK8 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Rfwd3Q8CIK8 Gm16379-201ENSMUST00000161469 348 ntBASIC11.9□□□□□ -0.5
Rfwd3Q8CIK8 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Rfwd3Q8CIK8 Gm23363-201ENSMUST00000175024 79 ntBASIC11.9□□□□□ -0.5
Rfwd3Q8CIK8 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC11.9□□□□□ -0.5
Rfwd3Q8CIK8 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC11.9□□□□□ -0.5
Rfwd3Q8CIK8 Gm8762-201ENSMUST00000193486 339 ntBASIC11.9□□□□□ -0.5
Rfwd3Q8CIK8 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC11.9□□□□□ -0.5
Rfwd3Q8CIK8 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Rfwd3Q8CIK8 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Rfwd3Q8CIK8 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Rfwd3Q8CIK8 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Rfwd3Q8CIK8 n-R5s195-201ENSMUST00000082891 119 ntBASIC11.9□□□□□ -0.5
Rfwd3Q8CIK8 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC11.9□□□□□ -0.5
Rfwd3Q8CIK8 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Rfwd3Q8CIK8 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Rfwd3Q8CIK8 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Rfwd3Q8CIK8 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC11.9□□□□□ -0.5
Rfwd3Q8CIK8 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Rfwd3Q8CIK8 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC11.9□□□□□ -0.5
Rfwd3Q8CIK8 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC11.9□□□□□ -0.5
Rfwd3Q8CIK8 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Rfwd3Q8CIK8 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Rfwd3Q8CIK8 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
Rfwd3Q8CIK8 Zmiz1-208ENSMUST00000162645 7482 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
Rfwd3Q8CIK8 Myo16-203ENSMUST00000207477 7169 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.51
Rfwd3Q8CIK8 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
Rfwd3Q8CIK8 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rfwd3Q8CIK8 Gm8793-201ENSMUST00000183069 1303 ntBASIC11.89□□□□□ -0.51
Rfwd3Q8CIK8 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC11.89□□□□□ -0.51
Rfwd3Q8CIK8 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC11.89□□□□□ -0.51
Rfwd3Q8CIK8 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rfwd3Q8CIK8 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Rfwd3Q8CIK8 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC11.89□□□□□ -0.51
Rfwd3Q8CIK8 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rfwd3Q8CIK8 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Rfwd3Q8CIK8 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Rfwd3Q8CIK8 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rfwd3Q8CIK8 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Rfwd3Q8CIK8 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC11.89□□□□□ -0.51
Rfwd3Q8CIK8 Gm12957-201ENSMUST00000117835 377 ntBASIC11.89□□□□□ -0.51
Rfwd3Q8CIK8 Gm11591-201ENSMUST00000120063 702 ntBASIC11.89□□□□□ -0.51
Rfwd3Q8CIK8 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC11.89□□□□□ -0.51
Rfwd3Q8CIK8 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Rfwd3Q8CIK8 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rfwd3Q8CIK8 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC11.89□□□□□ -0.51
Rfwd3Q8CIK8 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC11.89□□□□□ -0.51
Rfwd3Q8CIK8 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC11.89□□□□□ -0.51
Rfwd3Q8CIK8 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Rfwd3Q8CIK8 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Rfwd3Q8CIK8 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Rfwd3Q8CIK8 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC11.89□□□□□ -0.51
Rfwd3Q8CIK8 AC154305.4-201ENSMUST00000224520 614 ntBASIC11.89□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 68.7 ms