Protein–RNA interactions for Protein: Q8CGP0

Hist3h2bb, Histone H2B type 3-B, mousemouse

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist3h2bbQ8CGP0 Flad1-204ENSMUST00000129308 2892 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Hist3h2bbQ8CGP0 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Hist3h2bbQ8CGP0 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Hist3h2bbQ8CGP0 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Hist3h2bbQ8CGP0 Sema3g-201ENSMUST00000090180 4540 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Hist3h2bbQ8CGP0 Slc10a7-202ENSMUST00000209490 3485 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Hist3h2bbQ8CGP0 Wt1os-203ENSMUST00000172701 2960 ntTSL 2 BASIC9.46□□□□□ -0.9
Hist3h2bbQ8CGP0 Kpna7-202ENSMUST00000110673 2453 ntAPPRIS ALT2 TSL 5 BASIC9.46□□□□□ -0.9
Hist3h2bbQ8CGP0 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Hist3h2bbQ8CGP0 AC207128.2-201ENSMUST00000223708 1924 ntBASIC9.46□□□□□ -0.9
Hist3h2bbQ8CGP0 Glb1l2-207ENSMUST00000162702 2555 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Hist3h2bbQ8CGP0 Ddx52-201ENSMUST00000049257 3194 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Hist3h2bbQ8CGP0 Pnpla6-201ENSMUST00000004681 4438 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Hist3h2bbQ8CGP0 Olfr279-203ENSMUST00000216822 5605 ntAPPRIS P1 TSL 5 BASIC9.46□□□□□ -0.9
Hist3h2bbQ8CGP0 Ubtf-202ENSMUST00000079589 3286 ntAPPRIS P3 TSL 5 BASIC9.46□□□□□ -0.9
Hist3h2bbQ8CGP0 Bzw1-201ENSMUST00000050552 3876 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Hist3h2bbQ8CGP0 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC9.46□□□□□ -0.9
Hist3h2bbQ8CGP0 Emp1-202ENSMUST00000111907 2763 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Hist3h2bbQ8CGP0 Gm21939-201ENSMUST00000221137 2773 ntBASIC9.46□□□□□ -0.9
Hist3h2bbQ8CGP0 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Hist3h2bbQ8CGP0 Rasgef1a-203ENSMUST00000203804 2183 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Hist3h2bbQ8CGP0 Art2b-202ENSMUST00000209526 2819 ntAPPRIS ALT2 TSL 5 BASIC9.46□□□□□ -0.9
Hist3h2bbQ8CGP0 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Hist3h2bbQ8CGP0 4933407I05Rik-204ENSMUST00000217562 1561 ntBASIC9.46□□□□□ -0.9
Hist3h2bbQ8CGP0 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Hist3h2bbQ8CGP0 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Hist3h2bbQ8CGP0 Pom121l2-201ENSMUST00000017126 2960 ntAPPRIS P4 BASIC9.45□□□□□ -0.9
Hist3h2bbQ8CGP0 Cux1-204ENSMUST00000175975 10945 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Hist3h2bbQ8CGP0 Mybph-202ENSMUST00000191577 2320 ntAPPRIS P1 TSL 5 BASIC9.45□□□□□ -0.9
Hist3h2bbQ8CGP0 Rims2-204ENSMUST00000226410 3685 ntBASIC9.45□□□□□ -0.9
Hist3h2bbQ8CGP0 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Hist3h2bbQ8CGP0 Vstm2a-202ENSMUST00000109647 1745 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Hist3h2bbQ8CGP0 Itgal-204ENSMUST00000120857 4533 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Hist3h2bbQ8CGP0 Nacc2-202ENSMUST00000114159 6675 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Hist3h2bbQ8CGP0 Rnf13-210ENSMUST00000200497 2573 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Hist3h2bbQ8CGP0 Srrm2-201ENSMUST00000088621 8564 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Hist3h2bbQ8CGP0 Ikbkg-204ENSMUST00000114128 1867 ntAPPRIS ALT2 TSL 2 BASIC9.45□□□□□ -0.9
Hist3h2bbQ8CGP0 Gm37969-201ENSMUST00000195777 3409 ntBASIC9.45□□□□□ -0.9
Hist3h2bbQ8CGP0 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC9.45□□□□□ -0.9
Hist3h2bbQ8CGP0 Srpk3-201ENSMUST00000002081 1981 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Hist3h2bbQ8CGP0 Dclk1-213ENSMUST00000199702 2922 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Hist3h2bbQ8CGP0 Trpv6-201ENSMUST00000031902 2923 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Hist3h2bbQ8CGP0 Abca2-201ENSMUST00000102919 8033 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Hist3h2bbQ8CGP0 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Hist3h2bbQ8CGP0 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Hist3h2bbQ8CGP0 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC9.45□□□□□ -0.9
Hist3h2bbQ8CGP0 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC9.45□□□□□ -0.9
Hist3h2bbQ8CGP0 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC9.45□□□□□ -0.9
Hist3h2bbQ8CGP0 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC9.45□□□□□ -0.9
Hist3h2bbQ8CGP0 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC9.45□□□□□ -0.9
Hist3h2bbQ8CGP0 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC9.45□□□□□ -0.9
Hist3h2bbQ8CGP0 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Hist3h2bbQ8CGP0 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Hist3h2bbQ8CGP0 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC9.45□□□□□ -0.9
Hist3h2bbQ8CGP0 Gm7889-201ENSMUST00000185591 958 ntBASIC9.45□□□□□ -0.9
Hist3h2bbQ8CGP0 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC9.45□□□□□ -0.9
Hist3h2bbQ8CGP0 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC9.45□□□□□ -0.9
Hist3h2bbQ8CGP0 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC9.45□□□□□ -0.9
Hist3h2bbQ8CGP0 Gm43073-201ENSMUST00000198200 1189 ntBASIC9.45□□□□□ -0.9
Hist3h2bbQ8CGP0 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC9.45□□□□□ -0.9
Hist3h2bbQ8CGP0 AC108846.1-201ENSMUST00000214531 513 ntBASIC9.45□□□□□ -0.9
Hist3h2bbQ8CGP0 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Hist3h2bbQ8CGP0 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Hist3h2bbQ8CGP0 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Hist3h2bbQ8CGP0 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Hist3h2bbQ8CGP0 Flad1-202ENSMUST00000107426 2238 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Hist3h2bbQ8CGP0 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Hist3h2bbQ8CGP0 Poc1a-211ENSMUST00000217213 1398 ntTSL 5 BASIC9.45□□□□□ -0.9
Hist3h2bbQ8CGP0 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Hist3h2bbQ8CGP0 AI314180-202ENSMUST00000102889 7045 ntAPPRIS P2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Hist3h2bbQ8CGP0 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Hist3h2bbQ8CGP0 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Hist3h2bbQ8CGP0 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Hist3h2bbQ8CGP0 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC9.45□□□□□ -0.9
Hist3h2bbQ8CGP0 Clp1-203ENSMUST00000165219 2564 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Hist3h2bbQ8CGP0 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC9.45□□□□□ -0.9
Hist3h2bbQ8CGP0 Epx-201ENSMUST00000049768 2689 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Hist3h2bbQ8CGP0 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC9.45□□□□□ -0.9
Hist3h2bbQ8CGP0 Gm38157-201ENSMUST00000194178 1698 ntBASIC9.45□□□□□ -0.9
Hist3h2bbQ8CGP0 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC9.45□□□□□ -0.9
Hist3h2bbQ8CGP0 Rtn3-202ENSMUST00000065304 5030 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Hist3h2bbQ8CGP0 Frmd4a-202ENSMUST00000091497 6208 ntAPPRIS P3 TSL 1 (best) BASIC9.45□□□□□ -0.9
Hist3h2bbQ8CGP0 Fcrl1-203ENSMUST00000167200 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Hist3h2bbQ8CGP0 Slc36a4-201ENSMUST00000061568 6539 ntAPPRIS P2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Hist3h2bbQ8CGP0 Gm31938-201ENSMUST00000218081 1818 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Hist3h2bbQ8CGP0 Zfp518b-203ENSMUST00000179555 6816 ntAPPRIS P1 TSL 2 BASIC9.45□□□□□ -0.9
Hist3h2bbQ8CGP0 Cyp4b1-201ENSMUST00000102707 1892 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Hist3h2bbQ8CGP0 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Hist3h2bbQ8CGP0 Slc6a9-202ENSMUST00000063857 3146 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Hist3h2bbQ8CGP0 Mtss1l-205ENSMUST00000144041 3225 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Hist3h2bbQ8CGP0 Slc1a2-204ENSMUST00000111213 2093 ntTSL 5 BASIC9.44□□□□□ -0.9
Hist3h2bbQ8CGP0 Pfkfb3-202ENSMUST00000049849 2076 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Hist3h2bbQ8CGP0 Bpifb9b-201ENSMUST00000088921 2067 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Hist3h2bbQ8CGP0 Snx13-202ENSMUST00000163677 3681 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Hist3h2bbQ8CGP0 Smpd4-219ENSMUST00000170366 2256 ntTSL 5 BASIC9.44□□□□□ -0.9
Hist3h2bbQ8CGP0 Npepps-201ENSMUST00000001480 4215 ntAPPRIS P2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Hist3h2bbQ8CGP0 Mdm1-201ENSMUST00000020437 3074 ntAPPRIS P3 TSL 1 (best) BASIC9.44□□□□□ -0.9
Hist3h2bbQ8CGP0 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC9.44□□□□□ -0.9
Hist3h2bbQ8CGP0 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Hist3h2bbQ8CGP0 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 47.3 ms