Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ccdc28bQ8CEG5 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC12.49□□□□□ -0.41
Ccdc28bQ8CEG5 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ccdc28bQ8CEG5 Tmem129-201ENSMUST00000019439 2828 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ccdc28bQ8CEG5 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ccdc28bQ8CEG5 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ccdc28bQ8CEG5 Ikzf2-202ENSMUST00000187184 2013 ntTSL 5 BASIC12.49□□□□□ -0.41
Ccdc28bQ8CEG5 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Ccdc28bQ8CEG5 Abhd6-203ENSMUST00000225234 1958 ntBASIC12.49□□□□□ -0.41
Ccdc28bQ8CEG5 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Ccdc28bQ8CEG5 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Ccdc28bQ8CEG5 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ccdc28bQ8CEG5 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Ccdc28bQ8CEG5 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ccdc28bQ8CEG5 Gm18630-201ENSMUST00000222109 1397 ntBASIC12.49□□□□□ -0.41
Ccdc28bQ8CEG5 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ccdc28bQ8CEG5 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ccdc28bQ8CEG5 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Ccdc28bQ8CEG5 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC12.49□□□□□ -0.41
Ccdc28bQ8CEG5 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Ccdc28bQ8CEG5 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC12.49□□□□□ -0.41
Ccdc28bQ8CEG5 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC12.49□□□□□ -0.41
Ccdc28bQ8CEG5 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Ccdc28bQ8CEG5 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC12.49□□□□□ -0.41
Ccdc28bQ8CEG5 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC12.49□□□□□ -0.41
Ccdc28bQ8CEG5 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Ccdc28bQ8CEG5 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ccdc28bQ8CEG5 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Ccdc28bQ8CEG5 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ccdc28bQ8CEG5 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ccdc28bQ8CEG5 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ccdc28bQ8CEG5 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC12.49□□□□□ -0.41
Ccdc28bQ8CEG5 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ccdc28bQ8CEG5 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ccdc28bQ8CEG5 Cyb561d1-203ENSMUST00000106655 4275 ntAPPRIS P4 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ccdc28bQ8CEG5 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC12.49□□□□□ -0.41
Ccdc28bQ8CEG5 Ephx3-201ENSMUST00000087721 2416 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ccdc28bQ8CEG5 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Ccdc28bQ8CEG5 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ccdc28bQ8CEG5 Bcl2l14-201ENSMUST00000032321 2243 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ccdc28bQ8CEG5 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Ccdc28bQ8CEG5 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ccdc28bQ8CEG5 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC12.49□□□□□ -0.41
Ccdc28bQ8CEG5 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ccdc28bQ8CEG5 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Ccdc28bQ8CEG5 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Ccdc28bQ8CEG5 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ccdc28bQ8CEG5 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Ccdc28bQ8CEG5 Gucy2e-203ENSMUST00000108665 3645 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Ccdc28bQ8CEG5 Meaf6-205ENSMUST00000154689 4550 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ccdc28bQ8CEG5 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ccdc28bQ8CEG5 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Ccdc28bQ8CEG5 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ccdc28bQ8CEG5 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ccdc28bQ8CEG5 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC12.48□□□□□ -0.41
Ccdc28bQ8CEG5 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ccdc28bQ8CEG5 Gm15987-201ENSMUST00000141700 2231 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Ccdc28bQ8CEG5 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ccdc28bQ8CEG5 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Ccdc28bQ8CEG5 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ccdc28bQ8CEG5 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Ccdc28bQ8CEG5 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC12.48□□□□□ -0.41
Ccdc28bQ8CEG5 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC12.48□□□□□ -0.41
Ccdc28bQ8CEG5 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ccdc28bQ8CEG5 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ccdc28bQ8CEG5 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ccdc28bQ8CEG5 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ccdc28bQ8CEG5 Gm9797-201ENSMUST00000052902 613 ntBASIC12.48□□□□□ -0.41
Ccdc28bQ8CEG5 Gm20445-201ENSMUST00000061905 565 ntBASIC12.48□□□□□ -0.41
Ccdc28bQ8CEG5 Gm26035-201ENSMUST00000083065 308 ntBASIC12.48□□□□□ -0.41
Ccdc28bQ8CEG5 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ccdc28bQ8CEG5 Gm2822-201ENSMUST00000164299 2910 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Ccdc28bQ8CEG5 Olfr658-202ENSMUST00000210641 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ccdc28bQ8CEG5 Olfr658-201ENSMUST00000089296 2912 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ccdc28bQ8CEG5 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ccdc28bQ8CEG5 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Ccdc28bQ8CEG5 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC12.48□□□□□ -0.41
Ccdc28bQ8CEG5 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Ccdc28bQ8CEG5 Evl-204ENSMUST00000172409 1955 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Ccdc28bQ8CEG5 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ccdc28bQ8CEG5 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ccdc28bQ8CEG5 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ccdc28bQ8CEG5 Parvg-201ENSMUST00000023074 2619 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ccdc28bQ8CEG5 Btnl1-201ENSMUST00000080254 1861 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Ccdc28bQ8CEG5 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ccdc28bQ8CEG5 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Ccdc28bQ8CEG5 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ccdc28bQ8CEG5 Cpa5-201ENSMUST00000062758 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ccdc28bQ8CEG5 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC12.47□□□□□ -0.41
Ccdc28bQ8CEG5 Olfr464-204ENSMUST00000216461 2112 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Ccdc28bQ8CEG5 Rpap2-205ENSMUST00000112655 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ccdc28bQ8CEG5 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC12.47□□□□□ -0.41
Ccdc28bQ8CEG5 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC12.47□□□□□ -0.41
Ccdc28bQ8CEG5 Olfr177-202ENSMUST00000217377 2401 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Ccdc28bQ8CEG5 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ccdc28bQ8CEG5 Dbx2-201ENSMUST00000054244 3460 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ccdc28bQ8CEG5 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Ccdc28bQ8CEG5 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ccdc28bQ8CEG5 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Ccdc28bQ8CEG5 Gm14701-201ENSMUST00000117156 348 ntBASIC12.47□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms