Protein–RNA interactions for Protein: Q8CDN8

Ccdc38, Coiled-coil domain-containing protein 38, mousemouse

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38Q8CDN8 Tat-201ENSMUST00000001720 2375 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ccdc38Q8CDN8 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ccdc38Q8CDN8 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ccdc38Q8CDN8 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Ccdc38Q8CDN8 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Ccdc38Q8CDN8 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ccdc38Q8CDN8 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC14.08□□□□□ -0.16
Ccdc38Q8CDN8 Gm16296-201ENSMUST00000159905 325 ntBASIC14.08□□□□□ -0.16
Ccdc38Q8CDN8 Gm4271-201ENSMUST00000174444 973 ntBASIC14.08□□□□□ -0.16
Ccdc38Q8CDN8 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC14.08□□□□□ -0.16
Ccdc38Q8CDN8 Gm29705-201ENSMUST00000212598 474 ntBASIC14.08□□□□□ -0.16
Ccdc38Q8CDN8 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC14.08□□□□□ -0.16
Ccdc38Q8CDN8 Gm32025-201ENSMUST00000217960 307 ntBASIC14.08□□□□□ -0.16
Ccdc38Q8CDN8 Gm10371-202ENSMUST00000228010 1081 ntBASIC14.08□□□□□ -0.16
Ccdc38Q8CDN8 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ccdc38Q8CDN8 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ccdc38Q8CDN8 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ccdc38Q8CDN8 n-R5s77-201ENSMUST00000083757 119 ntBASIC14.08□□□□□ -0.16
Ccdc38Q8CDN8 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Ccdc38Q8CDN8 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ccdc38Q8CDN8 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ccdc38Q8CDN8 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ccdc38Q8CDN8 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ccdc38Q8CDN8 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ccdc38Q8CDN8 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ccdc38Q8CDN8 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ccdc38Q8CDN8 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ccdc38Q8CDN8 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Ccdc38Q8CDN8 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc38Q8CDN8 CT025678.1-201ENSMUST00000214795 2972 ntBASIC14.07□□□□□ -0.16
Ccdc38Q8CDN8 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC14.07□□□□□ -0.16
Ccdc38Q8CDN8 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc38Q8CDN8 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc38Q8CDN8 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc38Q8CDN8 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc38Q8CDN8 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc38Q8CDN8 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc38Q8CDN8 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc38Q8CDN8 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc38Q8CDN8 Gm44775-201ENSMUST00000207266 1456 ntBASIC14.07□□□□□ -0.16
Ccdc38Q8CDN8 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc38Q8CDN8 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc38Q8CDN8 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Ccdc38Q8CDN8 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc38Q8CDN8 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc38Q8CDN8 AC124433.1-202ENSMUST00000224762 1535 ntBASIC14.07□□□□□ -0.16
Ccdc38Q8CDN8 Gm5780-201ENSMUST00000217774 1834 ntBASIC14.07□□□□□ -0.16
Ccdc38Q8CDN8 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC14.07□□□□□ -0.16
Ccdc38Q8CDN8 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc38Q8CDN8 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc38Q8CDN8 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc38Q8CDN8 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc38Q8CDN8 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC14.07□□□□□ -0.16
Ccdc38Q8CDN8 Gm15703-201ENSMUST00000120250 880 ntBASIC14.07□□□□□ -0.16
Ccdc38Q8CDN8 Gm13394-201ENSMUST00000121658 1000 ntBASIC14.07□□□□□ -0.16
Ccdc38Q8CDN8 Gm14760-201ENSMUST00000121831 999 ntBASIC14.07□□□□□ -0.16
Ccdc38Q8CDN8 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC14.07□□□□□ -0.16
Ccdc38Q8CDN8 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc38Q8CDN8 Gm24644-201ENSMUST00000157114 139 ntBASIC14.07□□□□□ -0.16
Ccdc38Q8CDN8 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC14.07□□□□□ -0.16
Ccdc38Q8CDN8 Gm9630-201ENSMUST00000178304 885 ntBASIC14.07□□□□□ -0.16
Ccdc38Q8CDN8 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC14.07□□□□□ -0.16
Ccdc38Q8CDN8 Gm27486-201ENSMUST00000184923 80 ntBASIC14.07□□□□□ -0.16
Ccdc38Q8CDN8 Gm6652-201ENSMUST00000186414 1070 ntBASIC14.07□□□□□ -0.16
Ccdc38Q8CDN8 Gm4768-201ENSMUST00000206199 686 ntBASIC14.07□□□□□ -0.16
Ccdc38Q8CDN8 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc38Q8CDN8 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Ccdc38Q8CDN8 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc38Q8CDN8 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc38Q8CDN8 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc38Q8CDN8 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc38Q8CDN8 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC14.07□□□□□ -0.16
Ccdc38Q8CDN8 Gm10686-201ENSMUST00000215389 3247 ntBASIC14.07□□□□□ -0.16
Ccdc38Q8CDN8 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Ccdc38Q8CDN8 CT009757.3-201ENSMUST00000223367 2320 ntBASIC14.07□□□□□ -0.16
Ccdc38Q8CDN8 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc38Q8CDN8 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC14.06□□□□□ -0.16
Ccdc38Q8CDN8 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ccdc38Q8CDN8 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Ccdc38Q8CDN8 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ccdc38Q8CDN8 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ccdc38Q8CDN8 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ccdc38Q8CDN8 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ccdc38Q8CDN8 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Ccdc38Q8CDN8 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Ccdc38Q8CDN8 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC14.06□□□□□ -0.16
Ccdc38Q8CDN8 Gm12363-201ENSMUST00000122250 668 ntBASIC14.06□□□□□ -0.16
Ccdc38Q8CDN8 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ccdc38Q8CDN8 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
Ccdc38Q8CDN8 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Ccdc38Q8CDN8 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ccdc38Q8CDN8 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC14.06□□□□□ -0.16
Ccdc38Q8CDN8 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
Ccdc38Q8CDN8 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC14.06□□□□□ -0.16
Ccdc38Q8CDN8 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Ccdc38Q8CDN8 Gm7561-201ENSMUST00000211203 886 ntBASIC14.06□□□□□ -0.16
Ccdc38Q8CDN8 Gm5035-201ENSMUST00000215581 927 ntBASIC14.06□□□□□ -0.16
Ccdc38Q8CDN8 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ccdc38Q8CDN8 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ccdc38Q8CDN8 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 50.1 ms