Protein–RNA interactions for Protein: Q8CCS6

Pabpn1, Polyadenylate-binding protein 2, mousemouse

Known RBP Predictions only

Length 302 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pabpn1Q8CCS6 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Pabpn1Q8CCS6 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pabpn1Q8CCS6 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pabpn1Q8CCS6 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pabpn1Q8CCS6 CT025610.1-201ENSMUST00000224552 1786 ntBASIC19.16■□□□□ 0.66
Pabpn1Q8CCS6 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pabpn1Q8CCS6 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pabpn1Q8CCS6 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Pabpn1Q8CCS6 4930555B11Rik-201ENSMUST00000123210 1533 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Pabpn1Q8CCS6 Tarm1-203ENSMUST00000203821 1535 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pabpn1Q8CCS6 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pabpn1Q8CCS6 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pabpn1Q8CCS6 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC19.15■□□□□ 0.66
Pabpn1Q8CCS6 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pabpn1Q8CCS6 Gm18294-201ENSMUST00000176980 1748 ntBASIC19.15■□□□□ 0.66
Pabpn1Q8CCS6 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pabpn1Q8CCS6 Gsg1-202ENSMUST00000111909 1087 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Pabpn1Q8CCS6 Bola3-203ENSMUST00000122216 554 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Pabpn1Q8CCS6 Gm20822-201ENSMUST00000165756 687 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Pabpn1Q8CCS6 Gm20828-201ENSMUST00000170889 687 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Pabpn1Q8CCS6 Gm10100-201ENSMUST00000179726 363 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Pabpn1Q8CCS6 Gm38007-201ENSMUST00000192187 313 ntBASIC19.15■□□□□ 0.66
Pabpn1Q8CCS6 Gm37851-201ENSMUST00000193871 889 ntBASIC19.15■□□□□ 0.66
Pabpn1Q8CCS6 3100002H09Rik-201ENSMUST00000053604 873 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Pabpn1Q8CCS6 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pabpn1Q8CCS6 Gm6304-201ENSMUST00000096579 447 ntBASIC19.15■□□□□ 0.66
Pabpn1Q8CCS6 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Pabpn1Q8CCS6 Mrps23-201ENSMUST00000024486 1332 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pabpn1Q8CCS6 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Pabpn1Q8CCS6 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pabpn1Q8CCS6 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pabpn1Q8CCS6 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Pabpn1Q8CCS6 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pabpn1Q8CCS6 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pabpn1Q8CCS6 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC19.15■□□□□ 0.66
Pabpn1Q8CCS6 Abcg2-202ENSMUST00000114294 2178 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Pabpn1Q8CCS6 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
Pabpn1Q8CCS6 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Pabpn1Q8CCS6 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Pabpn1Q8CCS6 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Pabpn1Q8CCS6 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Pabpn1Q8CCS6 Gm43380-201ENSMUST00000200421 220 ntBASIC19.14■□□□□ 0.65
Pabpn1Q8CCS6 Gm7192-201ENSMUST00000210793 1137 ntBASIC19.14■□□□□ 0.65
Pabpn1Q8CCS6 Apoa5-205ENSMUST00000215187 495 ntTSL 5 BASIC19.14■□□□□ 0.65
Pabpn1Q8CCS6 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Pabpn1Q8CCS6 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC19.14■□□□□ 0.65
Pabpn1Q8CCS6 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Pabpn1Q8CCS6 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Pabpn1Q8CCS6 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Pabpn1Q8CCS6 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Pabpn1Q8CCS6 Gm21759-201ENSMUST00000178345 1828 ntBASIC19.14■□□□□ 0.65
Pabpn1Q8CCS6 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Pabpn1Q8CCS6 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Pabpn1Q8CCS6 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Pabpn1Q8CCS6 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Pabpn1Q8CCS6 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pabpn1Q8CCS6 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Pabpn1Q8CCS6 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pabpn1Q8CCS6 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Pabpn1Q8CCS6 Olfr1258-202ENSMUST00000111516 936 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Pabpn1Q8CCS6 Gm13394-201ENSMUST00000121658 1000 ntBASIC19.13■□□□□ 0.65
Pabpn1Q8CCS6 1700007P06Rik-201ENSMUST00000160380 823 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Pabpn1Q8CCS6 Gm28651-201ENSMUST00000185335 644 ntTSL 3 BASIC19.13■□□□□ 0.65
Pabpn1Q8CCS6 Gm8384-201ENSMUST00000190905 704 ntBASIC19.13■□□□□ 0.65
Pabpn1Q8CCS6 P4htm-204ENSMUST00000193621 1297 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Pabpn1Q8CCS6 Gm43695-201ENSMUST00000196545 196 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Pabpn1Q8CCS6 Gm39288-201ENSMUST00000210554 446 ntBASIC19.13■□□□□ 0.65
Pabpn1Q8CCS6 AC159282.1-204ENSMUST00000219472 780 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Pabpn1Q8CCS6 Tbc1d21-201ENSMUST00000040217 1283 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pabpn1Q8CCS6 Naa10-202ENSMUST00000096316 892 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
Pabpn1Q8CCS6 Gm10152-201ENSMUST00000193475 1344 ntBASIC19.13■□□□□ 0.65
Pabpn1Q8CCS6 Rnf183-203ENSMUST00000107455 1432 ntAPPRIS P1 TSL 3 BASIC19.13■□□□□ 0.65
Pabpn1Q8CCS6 Olfr156-203ENSMUST00000214843 1559 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Pabpn1Q8CCS6 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pabpn1Q8CCS6 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Pabpn1Q8CCS6 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pabpn1Q8CCS6 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pabpn1Q8CCS6 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Pabpn1Q8CCS6 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pabpn1Q8CCS6 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pabpn1Q8CCS6 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Pabpn1Q8CCS6 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Pabpn1Q8CCS6 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Pabpn1Q8CCS6 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Pabpn1Q8CCS6 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Pabpn1Q8CCS6 Asz1-201ENSMUST00000010940 1736 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Pabpn1Q8CCS6 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Pabpn1Q8CCS6 Ifna9-201ENSMUST00000102807 573 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Pabpn1Q8CCS6 Gm13094-201ENSMUST00000117930 409 ntBASIC19.12■□□□□ 0.65
Pabpn1Q8CCS6 Gm2044-201ENSMUST00000130771 911 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Pabpn1Q8CCS6 Polr3c-205ENSMUST00000141377 808 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Pabpn1Q8CCS6 Gm4775-201ENSMUST00000169588 402 ntBASIC19.12■□□□□ 0.65
Pabpn1Q8CCS6 Cklf-210ENSMUST00000212939 737 ntAPPRIS ALT2 TSL 3 BASIC19.12■□□□□ 0.65
Pabpn1Q8CCS6 Tmod3-205ENSMUST00000215821 898 ntTSL 3 BASIC19.12■□□□□ 0.65
Pabpn1Q8CCS6 Nkain2-205ENSMUST00000219125 1166 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Pabpn1Q8CCS6 Ebi3-201ENSMUST00000003274 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Pabpn1Q8CCS6 Gm6564-201ENSMUST00000075377 619 ntBASIC19.12■□□□□ 0.65
Pabpn1Q8CCS6 Olfr538-201ENSMUST00000084457 933 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Pabpn1Q8CCS6 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Pabpn1Q8CCS6 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 41.8 ms