Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Vps53Q8CCB4 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Vps53Q8CCB4 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Vps53Q8CCB4 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Vps53Q8CCB4 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
Vps53Q8CCB4 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Vps53Q8CCB4 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Vps53Q8CCB4 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Vps53Q8CCB4 Gm43579-201ENSMUST00000202387 1307 ntBASIC14.73□□□□□ -0.05
Vps53Q8CCB4 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC14.73□□□□□ -0.05
Vps53Q8CCB4 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Vps53Q8CCB4 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Vps53Q8CCB4 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Vps53Q8CCB4 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Vps53Q8CCB4 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC14.73□□□□□ -0.05
Vps53Q8CCB4 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC14.73□□□□□ -0.05
Vps53Q8CCB4 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Vps53Q8CCB4 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC14.73□□□□□ -0.05
Vps53Q8CCB4 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Vps53Q8CCB4 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
Vps53Q8CCB4 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Vps53Q8CCB4 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Vps53Q8CCB4 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC14.73□□□□□ -0.05
Vps53Q8CCB4 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
Vps53Q8CCB4 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Vps53Q8CCB4 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Vps53Q8CCB4 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Vps53Q8CCB4 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Vps53Q8CCB4 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC14.73□□□□□ -0.05
Vps53Q8CCB4 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Vps53Q8CCB4 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Vps53Q8CCB4 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Vps53Q8CCB4 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC14.73□□□□□ -0.05
Vps53Q8CCB4 AI314180-202ENSMUST00000102889 7045 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Vps53Q8CCB4 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Vps53Q8CCB4 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Vps53Q8CCB4 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Vps53Q8CCB4 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Vps53Q8CCB4 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Vps53Q8CCB4 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Vps53Q8CCB4 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Vps53Q8CCB4 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Vps53Q8CCB4 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC14.72□□□□□ -0.05
Vps53Q8CCB4 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Vps53Q8CCB4 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Vps53Q8CCB4 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Vps53Q8CCB4 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Vps53Q8CCB4 Frmd4a-202ENSMUST00000091497 6208 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Vps53Q8CCB4 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Vps53Q8CCB4 Gm2231-201ENSMUST00000125661 612 ntBASIC14.72□□□□□ -0.05
Vps53Q8CCB4 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Vps53Q8CCB4 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Vps53Q8CCB4 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Vps53Q8CCB4 Gm7895-201ENSMUST00000187459 1173 ntBASIC14.72□□□□□ -0.05
Vps53Q8CCB4 Gm37259-201ENSMUST00000193903 849 ntBASIC14.72□□□□□ -0.05
Vps53Q8CCB4 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC14.72□□□□□ -0.05
Vps53Q8CCB4 Gm44069-201ENSMUST00000204898 506 ntBASIC14.72□□□□□ -0.05
Vps53Q8CCB4 Gm44064-201ENSMUST00000204964 1087 ntBASIC14.72□□□□□ -0.05
Vps53Q8CCB4 AC134254.1-201ENSMUST00000221362 167 ntBASIC14.72□□□□□ -0.05
Vps53Q8CCB4 AC093022.5-201ENSMUST00000226841 1079 ntBASIC14.72□□□□□ -0.05
Vps53Q8CCB4 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Vps53Q8CCB4 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Vps53Q8CCB4 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
Vps53Q8CCB4 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC14.72□□□□□ -0.05
Vps53Q8CCB4 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Vps53Q8CCB4 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Vps53Q8CCB4 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Vps53Q8CCB4 Pafah1b2-201ENSMUST00000172450 6873 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Vps53Q8CCB4 Gm7993-201ENSMUST00000200970 1384 ntBASIC14.72□□□□□ -0.05
Vps53Q8CCB4 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Vps53Q8CCB4 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC14.72□□□□□ -0.05
Vps53Q8CCB4 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Vps53Q8CCB4 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Vps53Q8CCB4 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Vps53Q8CCB4 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Vps53Q8CCB4 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Vps53Q8CCB4 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Vps53Q8CCB4 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC14.71□□□□□ -0.05
Vps53Q8CCB4 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Vps53Q8CCB4 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC14.71□□□□□ -0.05
Vps53Q8CCB4 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Vps53Q8CCB4 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Vps53Q8CCB4 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
Vps53Q8CCB4 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
Vps53Q8CCB4 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
Vps53Q8CCB4 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
Vps53Q8CCB4 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
Vps53Q8CCB4 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
Vps53Q8CCB4 Gm13123-201ENSMUST00000122173 492 ntBASIC14.71□□□□□ -0.05
Vps53Q8CCB4 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Vps53Q8CCB4 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC14.71□□□□□ -0.05
Vps53Q8CCB4 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC14.71□□□□□ -0.05
Vps53Q8CCB4 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC14.71□□□□□ -0.05
Vps53Q8CCB4 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC14.71□□□□□ -0.05
Vps53Q8CCB4 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC14.71□□□□□ -0.05
Vps53Q8CCB4 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC14.71□□□□□ -0.05
Vps53Q8CCB4 CT573034.1-201ENSMUST00000222983 313 ntBASIC14.71□□□□□ -0.05
Vps53Q8CCB4 Gm8227-201ENSMUST00000223306 571 ntBASIC14.71□□□□□ -0.05
Vps53Q8CCB4 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Vps53Q8CCB4 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms