Protein–RNA interactions for Protein: Q8CA09

Gm4894, Predicted gene 4894, mousemouse

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm4894Q8CA09 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Gm4894Q8CA09 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Gm4894Q8CA09 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Gm4894Q8CA09 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC10.08□□□□□ -0.8
Gm4894Q8CA09 Gm14704-201ENSMUST00000120300 874 ntBASIC10.08□□□□□ -0.8
Gm4894Q8CA09 Gm13123-201ENSMUST00000122173 492 ntBASIC10.08□□□□□ -0.8
Gm4894Q8CA09 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC10.08□□□□□ -0.8
Gm4894Q8CA09 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Gm4894Q8CA09 Gm10576-201ENSMUST00000191927 825 ntBASIC10.08□□□□□ -0.8
Gm4894Q8CA09 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Gm4894Q8CA09 AL593843.1-201ENSMUST00000195891 145 ntBASIC10.08□□□□□ -0.8
Gm4894Q8CA09 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC10.08□□□□□ -0.8
Gm4894Q8CA09 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC10.08□□□□□ -0.8
Gm4894Q8CA09 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC10.08□□□□□ -0.8
Gm4894Q8CA09 Cdk7-205ENSMUST00000225990 1159 ntBASIC10.08□□□□□ -0.8
Gm4894Q8CA09 AC132317.1-201ENSMUST00000227227 962 ntBASIC10.08□□□□□ -0.8
Gm4894Q8CA09 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC10.08□□□□□ -0.8
Gm4894Q8CA09 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Gm4894Q8CA09 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Gm4894Q8CA09 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC10.08□□□□□ -0.8
Gm4894Q8CA09 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Gm4894Q8CA09 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Gm4894Q8CA09 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC10.08□□□□□ -0.8
Gm4894Q8CA09 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Gm4894Q8CA09 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Gm4894Q8CA09 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Gm4894Q8CA09 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Gm4894Q8CA09 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Gm4894Q8CA09 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Gm4894Q8CA09 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Gm4894Q8CA09 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC10.08□□□□□ -0.8
Gm4894Q8CA09 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC10.08□□□□□ -0.8
Gm4894Q8CA09 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Gm4894Q8CA09 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC10.08□□□□□ -0.8
Gm4894Q8CA09 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Gm4894Q8CA09 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Gm4894Q8CA09 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Gm4894Q8CA09 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC10.08□□□□□ -0.8
Gm4894Q8CA09 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Gm4894Q8CA09 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Gm4894Q8CA09 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Gm4894Q8CA09 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Gm4894Q8CA09 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC10.07□□□□□ -0.8
Gm4894Q8CA09 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
Gm4894Q8CA09 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Gm4894Q8CA09 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Gm4894Q8CA09 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Gm4894Q8CA09 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Gm4894Q8CA09 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Gm4894Q8CA09 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Gm4894Q8CA09 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Gm4894Q8CA09 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Gm4894Q8CA09 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Gm4894Q8CA09 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Gm4894Q8CA09 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Gm4894Q8CA09 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC10.07□□□□□ -0.8
Gm4894Q8CA09 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Gm4894Q8CA09 Gm13394-201ENSMUST00000121658 1000 ntBASIC10.07□□□□□ -0.8
Gm4894Q8CA09 Gm14760-201ENSMUST00000121831 999 ntBASIC10.07□□□□□ -0.8
Gm4894Q8CA09 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC10.07□□□□□ -0.8
Gm4894Q8CA09 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Gm4894Q8CA09 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Gm4894Q8CA09 Gm27701-201ENSMUST00000184498 110 ntBASIC10.07□□□□□ -0.8
Gm4894Q8CA09 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC10.07□□□□□ -0.8
Gm4894Q8CA09 Gm44772-201ENSMUST00000207623 1191 ntBASIC10.07□□□□□ -0.8
Gm4894Q8CA09 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
Gm4894Q8CA09 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC10.07□□□□□ -0.8
Gm4894Q8CA09 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Gm4894Q8CA09 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Gm4894Q8CA09 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Gm4894Q8CA09 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Gm4894Q8CA09 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Gm4894Q8CA09 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Gm4894Q8CA09 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Gm4894Q8CA09 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
Gm4894Q8CA09 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC10.07□□□□□ -0.8
Gm4894Q8CA09 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC10.07□□□□□ -0.8
Gm4894Q8CA09 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC10.07□□□□□ -0.8
Gm4894Q8CA09 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Gm4894Q8CA09 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC10.07□□□□□ -0.8
Gm4894Q8CA09 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC10.07□□□□□ -0.8
Gm4894Q8CA09 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Gm4894Q8CA09 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC10.07□□□□□ -0.8
Gm4894Q8CA09 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC10.07□□□□□ -0.8
Gm4894Q8CA09 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Gm4894Q8CA09 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC10.07□□□□□ -0.8
Gm4894Q8CA09 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Gm4894Q8CA09 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC10.07□□□□□ -0.8
Gm4894Q8CA09 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Gm4894Q8CA09 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Gm4894Q8CA09 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Gm4894Q8CA09 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC10.06□□□□□ -0.8
Gm4894Q8CA09 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC10.06□□□□□ -0.8
Gm4894Q8CA09 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Gm4894Q8CA09 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Gm4894Q8CA09 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Gm4894Q8CA09 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Gm4894Q8CA09 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Gm4894Q8CA09 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Gm4894Q8CA09 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 43.1 ms