Protein–RNA interactions for Protein: Q8C263

Ska3, Spindle and kinetochore-associated protein 3, mousemouse

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ska3Q8C263 Gm24526-201ENSMUST00000082921 158 ntBASIC11.91□□□□□ -0.5
Ska3Q8C263 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ska3Q8C263 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ska3Q8C263 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Ska3Q8C263 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ska3Q8C263 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ska3Q8C263 CT025624.1-201ENSMUST00000224007 2700 ntBASIC11.91□□□□□ -0.5
Ska3Q8C263 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Ska3Q8C263 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC11.91□□□□□ -0.5
Ska3Q8C263 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Ska3Q8C263 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Ska3Q8C263 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Ska3Q8C263 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ska3Q8C263 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ska3Q8C263 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ska3Q8C263 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ska3Q8C263 Gm13722-201ENSMUST00000117964 3066 ntBASIC11.9□□□□□ -0.5
Ska3Q8C263 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ska3Q8C263 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ska3Q8C263 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ska3Q8C263 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ska3Q8C263 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ska3Q8C263 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Ska3Q8C263 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ska3Q8C263 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ska3Q8C263 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ska3Q8C263 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ska3Q8C263 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Ska3Q8C263 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC11.9□□□□□ -0.5
Ska3Q8C263 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC11.9□□□□□ -0.5
Ska3Q8C263 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ska3Q8C263 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Ska3Q8C263 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Ska3Q8C263 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Ska3Q8C263 Gm8062-201ENSMUST00000139696 444 ntBASIC11.9□□□□□ -0.5
Ska3Q8C263 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC11.9□□□□□ -0.5
Ska3Q8C263 Gm37008-201ENSMUST00000195712 319 ntBASIC11.9□□□□□ -0.5
Ska3Q8C263 Gm19184-201ENSMUST00000196798 928 ntBASIC11.9□□□□□ -0.5
Ska3Q8C263 Gm5781-201ENSMUST00000219792 443 ntBASIC11.9□□□□□ -0.5
Ska3Q8C263 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Ska3Q8C263 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ska3Q8C263 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ska3Q8C263 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ska3Q8C263 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ska3Q8C263 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Ska3Q8C263 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ska3Q8C263 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ska3Q8C263 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ska3Q8C263 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ska3Q8C263 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC11.9□□□□□ -0.5
Ska3Q8C263 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Ska3Q8C263 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
Ska3Q8C263 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC11.9□□□□□ -0.51
Ska3Q8C263 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.51
Ska3Q8C263 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.51
Ska3Q8C263 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC11.9□□□□□ -0.51
Ska3Q8C263 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC11.9□□□□□ -0.51
Ska3Q8C263 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Ska3Q8C263 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Ska3Q8C263 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ska3Q8C263 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ska3Q8C263 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ska3Q8C263 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Ska3Q8C263 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Ska3Q8C263 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ska3Q8C263 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Ska3Q8C263 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
Ska3Q8C263 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ska3Q8C263 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ska3Q8C263 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ska3Q8C263 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC11.89□□□□□ -0.51
Ska3Q8C263 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ska3Q8C263 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Ska3Q8C263 Gm3052-202ENSMUST00000188254 2224 ntBASIC11.89□□□□□ -0.51
Ska3Q8C263 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ska3Q8C263 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ska3Q8C263 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC11.89□□□□□ -0.51
Ska3Q8C263 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Ska3Q8C263 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Ska3Q8C263 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC11.89□□□□□ -0.51
Ska3Q8C263 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Ska3Q8C263 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC11.89□□□□□ -0.51
Ska3Q8C263 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC11.89□□□□□ -0.51
Ska3Q8C263 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC11.89□□□□□ -0.51
Ska3Q8C263 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
Ska3Q8C263 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Ska3Q8C263 Gm3890-201ENSMUST00000182416 207 ntBASIC11.89□□□□□ -0.51
Ska3Q8C263 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC11.89□□□□□ -0.51
Ska3Q8C263 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
Ska3Q8C263 Gm38092-201ENSMUST00000195600 653 ntBASIC11.89□□□□□ -0.51
Ska3Q8C263 AC154462.2-201ENSMUST00000227519 370 ntBASIC11.89□□□□□ -0.51
Ska3Q8C263 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ska3Q8C263 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ska3Q8C263 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC11.89□□□□□ -0.51
Ska3Q8C263 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Ska3Q8C263 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Ska3Q8C263 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ska3Q8C263 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC11.89□□□□□ -0.51
Ska3Q8C263 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ska3Q8C263 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 64.8 ms