Protein–RNA interactions for Protein: Q8C120

Sh3rf3, SH3 domain-containing RING finger protein 3, mousemouse

Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf3Q8C120 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sh3rf3Q8C120 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sh3rf3Q8C120 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sh3rf3Q8C120 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sh3rf3Q8C120 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sh3rf3Q8C120 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sh3rf3Q8C120 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sh3rf3Q8C120 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC13.17□□□□□ -0.3
Sh3rf3Q8C120 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC13.17□□□□□ -0.3
Sh3rf3Q8C120 Nupl1-206ENSMUST00000225111 2936 ntBASIC13.17□□□□□ -0.3
Sh3rf3Q8C120 Gm44758-201ENSMUST00000206096 2068 ntBASIC13.17□□□□□ -0.3
Sh3rf3Q8C120 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Sh3rf3Q8C120 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Sh3rf3Q8C120 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC13.17□□□□□ -0.3
Sh3rf3Q8C120 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sh3rf3Q8C120 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sh3rf3Q8C120 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Sh3rf3Q8C120 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
Sh3rf3Q8C120 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sh3rf3Q8C120 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sh3rf3Q8C120 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sh3rf3Q8C120 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sh3rf3Q8C120 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC13.16□□□□□ -0.3
Sh3rf3Q8C120 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sh3rf3Q8C120 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sh3rf3Q8C120 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Sh3rf3Q8C120 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sh3rf3Q8C120 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Sh3rf3Q8C120 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sh3rf3Q8C120 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC13.16□□□□□ -0.3
Sh3rf3Q8C120 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sh3rf3Q8C120 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sh3rf3Q8C120 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sh3rf3Q8C120 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sh3rf3Q8C120 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sh3rf3Q8C120 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Sh3rf3Q8C120 Gm45266-201ENSMUST00000210111 2173 ntBASIC13.16□□□□□ -0.3
Sh3rf3Q8C120 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Sh3rf3Q8C120 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Sh3rf3Q8C120 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Sh3rf3Q8C120 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Sh3rf3Q8C120 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC13.16□□□□□ -0.3
Sh3rf3Q8C120 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC13.16□□□□□ -0.3
Sh3rf3Q8C120 Gm16296-201ENSMUST00000159905 325 ntBASIC13.16□□□□□ -0.3
Sh3rf3Q8C120 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC13.16□□□□□ -0.3
Sh3rf3Q8C120 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC13.16□□□□□ -0.3
Sh3rf3Q8C120 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC13.16□□□□□ -0.3
Sh3rf3Q8C120 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC13.16□□□□□ -0.3
Sh3rf3Q8C120 AC165260.3-202ENSMUST00000224550 1031 ntBASIC13.16□□□□□ -0.3
Sh3rf3Q8C120 AC069562.3-201ENSMUST00000225387 587 ntBASIC13.16□□□□□ -0.3
Sh3rf3Q8C120 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC13.16□□□□□ -0.3
Sh3rf3Q8C120 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sh3rf3Q8C120 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sh3rf3Q8C120 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sh3rf3Q8C120 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sh3rf3Q8C120 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Sh3rf3Q8C120 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Sh3rf3Q8C120 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Sh3rf3Q8C120 Gm6992-201ENSMUST00000217973 1607 ntBASIC13.16□□□□□ -0.3
Sh3rf3Q8C120 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sh3rf3Q8C120 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Sh3rf3Q8C120 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Sh3rf3Q8C120 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Sh3rf3Q8C120 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Sh3rf3Q8C120 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sh3rf3Q8C120 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sh3rf3Q8C120 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sh3rf3Q8C120 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sh3rf3Q8C120 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sh3rf3Q8C120 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sh3rf3Q8C120 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sh3rf3Q8C120 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
Sh3rf3Q8C120 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
Sh3rf3Q8C120 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Sh3rf3Q8C120 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Sh3rf3Q8C120 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sh3rf3Q8C120 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sh3rf3Q8C120 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sh3rf3Q8C120 Dctn4-202ENSMUST00000223590 1530 ntBASIC13.15□□□□□ -0.3
Sh3rf3Q8C120 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC13.15□□□□□ -0.3
Sh3rf3Q8C120 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sh3rf3Q8C120 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sh3rf3Q8C120 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sh3rf3Q8C120 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Sh3rf3Q8C120 Gm15824-201ENSMUST00000119516 955 ntBASIC13.15□□□□□ -0.3
Sh3rf3Q8C120 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
Sh3rf3Q8C120 Gm11591-201ENSMUST00000120063 702 ntBASIC13.15□□□□□ -0.3
Sh3rf3Q8C120 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sh3rf3Q8C120 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC13.15□□□□□ -0.3
Sh3rf3Q8C120 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC13.15□□□□□ -0.3
Sh3rf3Q8C120 Gm6652-201ENSMUST00000186414 1070 ntBASIC13.15□□□□□ -0.3
Sh3rf3Q8C120 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Sh3rf3Q8C120 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Sh3rf3Q8C120 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Sh3rf3Q8C120 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sh3rf3Q8C120 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
Sh3rf3Q8C120 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sh3rf3Q8C120 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sh3rf3Q8C120 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sh3rf3Q8C120 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 96.6 ms