Protein–RNA interactions for Protein: Q8BUM9

Usp43, Ubiquitin carboxyl-terminal hydrolase 43, mousemouse

Predictions only

Length 1,132 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp43Q8BUM9 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Usp43Q8BUM9 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Usp43Q8BUM9 Gm5781-201ENSMUST00000219792 443 ntBASIC12.79□□□□□ -0.36
Usp43Q8BUM9 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC12.79□□□□□ -0.36
Usp43Q8BUM9 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Usp43Q8BUM9 AL732506.1-201ENSMUST00000226420 281 ntBASIC12.79□□□□□ -0.36
Usp43Q8BUM9 Gm22058-201ENSMUST00000083393 310 ntBASIC12.79□□□□□ -0.36
Usp43Q8BUM9 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Usp43Q8BUM9 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Usp43Q8BUM9 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Usp43Q8BUM9 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Usp43Q8BUM9 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC12.79□□□□□ -0.36
Usp43Q8BUM9 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Usp43Q8BUM9 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Usp43Q8BUM9 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Usp43Q8BUM9 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Usp43Q8BUM9 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC12.79□□□□□ -0.36
Usp43Q8BUM9 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Usp43Q8BUM9 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Usp43Q8BUM9 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Usp43Q8BUM9 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Usp43Q8BUM9 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Usp43Q8BUM9 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Usp43Q8BUM9 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Usp43Q8BUM9 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Usp43Q8BUM9 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Usp43Q8BUM9 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Usp43Q8BUM9 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Usp43Q8BUM9 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Usp43Q8BUM9 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Usp43Q8BUM9 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Usp43Q8BUM9 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Usp43Q8BUM9 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Usp43Q8BUM9 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Usp43Q8BUM9 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC12.78□□□□□ -0.36
Usp43Q8BUM9 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC12.78□□□□□ -0.36
Usp43Q8BUM9 Gm24548-201ENSMUST00000158650 108 ntBASIC12.78□□□□□ -0.36
Usp43Q8BUM9 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Usp43Q8BUM9 Gm8018-201ENSMUST00000173536 789 ntBASIC12.78□□□□□ -0.36
Usp43Q8BUM9 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Usp43Q8BUM9 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Usp43Q8BUM9 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Usp43Q8BUM9 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC12.78□□□□□ -0.36
Usp43Q8BUM9 Gm5904-201ENSMUST00000210286 865 ntBASIC12.78□□□□□ -0.36
Usp43Q8BUM9 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Usp43Q8BUM9 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC12.78□□□□□ -0.36
Usp43Q8BUM9 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Usp43Q8BUM9 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Usp43Q8BUM9 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC12.78□□□□□ -0.36
Usp43Q8BUM9 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Usp43Q8BUM9 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Usp43Q8BUM9 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Usp43Q8BUM9 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC12.78□□□□□ -0.36
Usp43Q8BUM9 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Usp43Q8BUM9 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Usp43Q8BUM9 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Usp43Q8BUM9 Gm37437-201ENSMUST00000194451 1937 ntBASIC12.78□□□□□ -0.36
Usp43Q8BUM9 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Usp43Q8BUM9 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC12.78□□□□□ -0.36
Usp43Q8BUM9 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Usp43Q8BUM9 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Usp43Q8BUM9 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Usp43Q8BUM9 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Usp43Q8BUM9 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.36
Usp43Q8BUM9 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Usp43Q8BUM9 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Usp43Q8BUM9 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Usp43Q8BUM9 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Usp43Q8BUM9 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Usp43Q8BUM9 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
Usp43Q8BUM9 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Usp43Q8BUM9 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Usp43Q8BUM9 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Usp43Q8BUM9 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Usp43Q8BUM9 Gm45484-201ENSMUST00000210310 1141 ntBASIC12.77□□□□□ -0.37
Usp43Q8BUM9 Gm45930-201ENSMUST00000221330 292 ntBASIC12.77□□□□□ -0.37
Usp43Q8BUM9 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Usp43Q8BUM9 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Usp43Q8BUM9 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Usp43Q8BUM9 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC12.77□□□□□ -0.37
Usp43Q8BUM9 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Usp43Q8BUM9 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Usp43Q8BUM9 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Usp43Q8BUM9 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Usp43Q8BUM9 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC12.77□□□□□ -0.37
Usp43Q8BUM9 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Usp43Q8BUM9 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Usp43Q8BUM9 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Usp43Q8BUM9 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Usp43Q8BUM9 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Usp43Q8BUM9 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Usp43Q8BUM9 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Usp43Q8BUM9 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Usp43Q8BUM9 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Usp43Q8BUM9 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Usp43Q8BUM9 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Usp43Q8BUM9 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Usp43Q8BUM9 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC12.76□□□□□ -0.37
Usp43Q8BUM9 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Usp43Q8BUM9 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms