Protein–RNA interactions for Protein: Q8BQZ5

Cpsf4, Cleavage and polyadenylation specificity factor subunit 4, mousemouse

Known RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4Q8BQZ5 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cpsf4Q8BQZ5 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cpsf4Q8BQZ5 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cpsf4Q8BQZ5 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cpsf4Q8BQZ5 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cpsf4Q8BQZ5 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Cpsf4Q8BQZ5 Aff3-202ENSMUST00000039827 6010 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Cpsf4Q8BQZ5 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cpsf4Q8BQZ5 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cpsf4Q8BQZ5 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cpsf4Q8BQZ5 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cpsf4Q8BQZ5 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC12.26□□□□□ -0.45
Cpsf4Q8BQZ5 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cpsf4Q8BQZ5 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cpsf4Q8BQZ5 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cpsf4Q8BQZ5 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Cpsf4Q8BQZ5 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC12.26□□□□□ -0.45
Cpsf4Q8BQZ5 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Cpsf4Q8BQZ5 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Cpsf4Q8BQZ5 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Cpsf4Q8BQZ5 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC12.26□□□□□ -0.45
Cpsf4Q8BQZ5 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC12.26□□□□□ -0.45
Cpsf4Q8BQZ5 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cpsf4Q8BQZ5 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Cpsf4Q8BQZ5 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC12.26□□□□□ -0.45
Cpsf4Q8BQZ5 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Cpsf4Q8BQZ5 Triobp-203ENSMUST00000109689 7187 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cpsf4Q8BQZ5 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cpsf4Q8BQZ5 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Cpsf4Q8BQZ5 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC12.26□□□□□ -0.45
Cpsf4Q8BQZ5 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cpsf4Q8BQZ5 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cpsf4Q8BQZ5 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cpsf4Q8BQZ5 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cpsf4Q8BQZ5 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Cpsf4Q8BQZ5 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cpsf4Q8BQZ5 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cpsf4Q8BQZ5 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Cpsf4Q8BQZ5 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC12.25□□□□□ -0.45
Cpsf4Q8BQZ5 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cpsf4Q8BQZ5 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cpsf4Q8BQZ5 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Cpsf4Q8BQZ5 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cpsf4Q8BQZ5 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cpsf4Q8BQZ5 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Cpsf4Q8BQZ5 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Cpsf4Q8BQZ5 Gm44414-201ENSMUST00000203660 2109 ntBASIC12.25□□□□□ -0.45
Cpsf4Q8BQZ5 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cpsf4Q8BQZ5 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cpsf4Q8BQZ5 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC12.25□□□□□ -0.45
Cpsf4Q8BQZ5 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Cpsf4Q8BQZ5 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cpsf4Q8BQZ5 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Cpsf4Q8BQZ5 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Cpsf4Q8BQZ5 Gm12742-201ENSMUST00000117326 410 ntBASIC12.25□□□□□ -0.45
Cpsf4Q8BQZ5 Gm13392-201ENSMUST00000117708 150 ntBASIC12.25□□□□□ -0.45
Cpsf4Q8BQZ5 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC12.25□□□□□ -0.45
Cpsf4Q8BQZ5 Gm2639-201ENSMUST00000156881 1297 ntBASIC12.25□□□□□ -0.45
Cpsf4Q8BQZ5 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Cpsf4Q8BQZ5 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC12.25□□□□□ -0.45
Cpsf4Q8BQZ5 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC12.25□□□□□ -0.45
Cpsf4Q8BQZ5 Gm38297-201ENSMUST00000195122 1057 ntBASIC12.25□□□□□ -0.45
Cpsf4Q8BQZ5 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC12.25□□□□□ -0.45
Cpsf4Q8BQZ5 AC138604.1-201ENSMUST00000226969 739 ntBASIC12.25□□□□□ -0.45
Cpsf4Q8BQZ5 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cpsf4Q8BQZ5 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cpsf4Q8BQZ5 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Cpsf4Q8BQZ5 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Cpsf4Q8BQZ5 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Cpsf4Q8BQZ5 Dock6-201ENSMUST00000034728 6467 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Cpsf4Q8BQZ5 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cpsf4Q8BQZ5 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC12.25□□□□□ -0.45
Cpsf4Q8BQZ5 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Cpsf4Q8BQZ5 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cpsf4Q8BQZ5 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cpsf4Q8BQZ5 Gm8706-201ENSMUST00000197372 1491 ntBASIC12.25□□□□□ -0.45
Cpsf4Q8BQZ5 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Cpsf4Q8BQZ5 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cpsf4Q8BQZ5 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Cpsf4Q8BQZ5 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cpsf4Q8BQZ5 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cpsf4Q8BQZ5 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cpsf4Q8BQZ5 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cpsf4Q8BQZ5 Gm43463-201ENSMUST00000195967 1803 ntBASIC12.25□□□□□ -0.45
Cpsf4Q8BQZ5 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cpsf4Q8BQZ5 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Cpsf4Q8BQZ5 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cpsf4Q8BQZ5 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cpsf4Q8BQZ5 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cpsf4Q8BQZ5 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cpsf4Q8BQZ5 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC12.24□□□□□ -0.45
Cpsf4Q8BQZ5 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Cpsf4Q8BQZ5 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Cpsf4Q8BQZ5 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cpsf4Q8BQZ5 Gm9200-201ENSMUST00000118513 1354 ntBASIC12.24□□□□□ -0.45
Cpsf4Q8BQZ5 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC12.24□□□□□ -0.45
Cpsf4Q8BQZ5 Gm16479-201ENSMUST00000121706 932 ntBASIC12.24□□□□□ -0.45
Cpsf4Q8BQZ5 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Cpsf4Q8BQZ5 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Cpsf4Q8BQZ5 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 56.5 ms