Protein–RNA interactions for Protein: Q8BL00

Cdhr3, Cadherin-related family member 3, mousemouse

Predictions only

Length 831 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdhr3Q8BL00 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC11.02□□□□□ -0.65
Cdhr3Q8BL00 Gm27390-201ENSMUST00000184516 176 ntBASIC11.02□□□□□ -0.65
Cdhr3Q8BL00 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC11.02□□□□□ -0.65
Cdhr3Q8BL00 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC11.02□□□□□ -0.65
Cdhr3Q8BL00 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC11.02□□□□□ -0.65
Cdhr3Q8BL00 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC11.02□□□□□ -0.65
Cdhr3Q8BL00 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC11.02□□□□□ -0.65
Cdhr3Q8BL00 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC11.02□□□□□ -0.65
Cdhr3Q8BL00 AC155252.1-201ENSMUST00000226462 1208 ntBASIC11.02□□□□□ -0.65
Cdhr3Q8BL00 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cdhr3Q8BL00 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC11.02□□□□□ -0.65
Cdhr3Q8BL00 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
Cdhr3Q8BL00 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cdhr3Q8BL00 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cdhr3Q8BL00 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
Cdhr3Q8BL00 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cdhr3Q8BL00 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cdhr3Q8BL00 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cdhr3Q8BL00 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
Cdhr3Q8BL00 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC11.02□□□□□ -0.65
Cdhr3Q8BL00 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC11.02□□□□□ -0.65
Cdhr3Q8BL00 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC11.02□□□□□ -0.65
Cdhr3Q8BL00 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
Cdhr3Q8BL00 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cdhr3Q8BL00 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cdhr3Q8BL00 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC11.01□□□□□ -0.65
Cdhr3Q8BL00 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cdhr3Q8BL00 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Cdhr3Q8BL00 Gm45053-201ENSMUST00000206112 2499 ntBASIC11.01□□□□□ -0.65
Cdhr3Q8BL00 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cdhr3Q8BL00 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cdhr3Q8BL00 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Cdhr3Q8BL00 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC11.01□□□□□ -0.65
Cdhr3Q8BL00 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cdhr3Q8BL00 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC11.01□□□□□ -0.65
Cdhr3Q8BL00 Gm18227-201ENSMUST00000211082 1468 ntBASIC11.01□□□□□ -0.65
Cdhr3Q8BL00 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC11.01□□□□□ -0.65
Cdhr3Q8BL00 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Cdhr3Q8BL00 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC11.01□□□□□ -0.65
Cdhr3Q8BL00 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cdhr3Q8BL00 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Cdhr3Q8BL00 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC11.01□□□□□ -0.65
Cdhr3Q8BL00 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cdhr3Q8BL00 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cdhr3Q8BL00 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cdhr3Q8BL00 Gm13612-201ENSMUST00000119276 390 ntBASIC11.01□□□□□ -0.65
Cdhr3Q8BL00 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Cdhr3Q8BL00 Gm23363-201ENSMUST00000175024 79 ntBASIC11.01□□□□□ -0.65
Cdhr3Q8BL00 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Cdhr3Q8BL00 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Cdhr3Q8BL00 AL593843.1-201ENSMUST00000195891 145 ntBASIC11.01□□□□□ -0.65
Cdhr3Q8BL00 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Cdhr3Q8BL00 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Cdhr3Q8BL00 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cdhr3Q8BL00 Gm8598-201ENSMUST00000221184 836 ntBASIC11.01□□□□□ -0.65
Cdhr3Q8BL00 Gm10371-202ENSMUST00000228010 1081 ntBASIC11.01□□□□□ -0.65
Cdhr3Q8BL00 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cdhr3Q8BL00 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Cdhr3Q8BL00 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Cdhr3Q8BL00 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
Cdhr3Q8BL00 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC11.01□□□□□ -0.65
Cdhr3Q8BL00 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cdhr3Q8BL00 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC11.01□□□□□ -0.65
Cdhr3Q8BL00 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC11.01□□□□□ -0.65
Cdhr3Q8BL00 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cdhr3Q8BL00 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Cdhr3Q8BL00 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cdhr3Q8BL00 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cdhr3Q8BL00 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Cdhr3Q8BL00 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC11.01□□□□□ -0.65
Cdhr3Q8BL00 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC11□□□□□ -0.65
Cdhr3Q8BL00 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Cdhr3Q8BL00 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Cdhr3Q8BL00 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
Cdhr3Q8BL00 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Cdhr3Q8BL00 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Cdhr3Q8BL00 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Cdhr3Q8BL00 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
Cdhr3Q8BL00 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
Cdhr3Q8BL00 AL645783.1-201ENSMUST00000221416 1832 ntBASIC11□□□□□ -0.65
Cdhr3Q8BL00 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Cdhr3Q8BL00 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Cdhr3Q8BL00 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Cdhr3Q8BL00 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
Cdhr3Q8BL00 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
Cdhr3Q8BL00 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC11□□□□□ -0.65
Cdhr3Q8BL00 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Cdhr3Q8BL00 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Cdhr3Q8BL00 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Cdhr3Q8BL00 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Cdhr3Q8BL00 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Cdhr3Q8BL00 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC11□□□□□ -0.65
Cdhr3Q8BL00 Gm7488-201ENSMUST00000117148 684 ntBASIC11□□□□□ -0.65
Cdhr3Q8BL00 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC11□□□□□ -0.65
Cdhr3Q8BL00 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC11□□□□□ -0.65
Cdhr3Q8BL00 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC11□□□□□ -0.65
Cdhr3Q8BL00 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC11□□□□□ -0.65
Cdhr3Q8BL00 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC11□□□□□ -0.65
Cdhr3Q8BL00 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Cdhr3Q8BL00 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC11□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms