Protein–RNA interactions for Protein: Q8BKX6

Smg1, Serine/threonine-protein kinase SMG1, mousemouse

Known RBP Predictions only

Length 3,658 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smg1Q8BKX6 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Smg1Q8BKX6 Mir326-201ENSMUST00000083637 95 ntBASIC10.39□□□□□ -0.75
Smg1Q8BKX6 Hddc3-201ENSMUST00000032747 1510 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Smg1Q8BKX6 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Smg1Q8BKX6 Gm37644-201ENSMUST00000192190 2270 ntBASIC10.39□□□□□ -0.75
Smg1Q8BKX6 Gm44056-201ENSMUST00000204623 1427 ntBASIC10.39□□□□□ -0.75
Smg1Q8BKX6 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Smg1Q8BKX6 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Smg1Q8BKX6 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Smg1Q8BKX6 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
Smg1Q8BKX6 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC10.38□□□□□ -0.75
Smg1Q8BKX6 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Smg1Q8BKX6 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Smg1Q8BKX6 Gm14213-201ENSMUST00000119778 768 ntBASIC10.38□□□□□ -0.75
Smg1Q8BKX6 Gm7722-201ENSMUST00000120646 741 ntBASIC10.38□□□□□ -0.75
Smg1Q8BKX6 Smim5-202ENSMUST00000142089 685 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Smg1Q8BKX6 Gm15726-201ENSMUST00000144738 509 ntTSL 3 BASIC10.38□□□□□ -0.75
Smg1Q8BKX6 1700123M08Rik-202ENSMUST00000146154 770 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Smg1Q8BKX6 Gm9136-201ENSMUST00000193368 454 ntBASIC10.38□□□□□ -0.75
Smg1Q8BKX6 3110009M11Rik-201ENSMUST00000208647 892 ntBASIC10.38□□□□□ -0.75
Smg1Q8BKX6 1700011B04Rik-204ENSMUST00000220859 422 ntTSL 5 BASIC10.38□□□□□ -0.75
Smg1Q8BKX6 Gm46336-201ENSMUST00000221894 279 ntTSL 5 BASIC10.38□□□□□ -0.75
Smg1Q8BKX6 AC130477.1-201ENSMUST00000226982 420 ntBASIC10.38□□□□□ -0.75
Smg1Q8BKX6 Mcts2-201ENSMUST00000062148 917 ntAPPRIS P1 BASIC10.38□□□□□ -0.75
Smg1Q8BKX6 Cdkn3-201ENSMUST00000067426 917 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Smg1Q8BKX6 Mir339-201ENSMUST00000083659 96 ntBASIC10.38□□□□□ -0.75
Smg1Q8BKX6 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
Smg1Q8BKX6 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC10.38□□□□□ -0.75
Smg1Q8BKX6 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Smg1Q8BKX6 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Smg1Q8BKX6 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
Smg1Q8BKX6 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Smg1Q8BKX6 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC10.38□□□□□ -0.75
Smg1Q8BKX6 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Smg1Q8BKX6 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Smg1Q8BKX6 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Smg1Q8BKX6 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Smg1Q8BKX6 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Smg1Q8BKX6 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Smg1Q8BKX6 Gm11949-201ENSMUST00000117640 372 ntBASIC10.38□□□□□ -0.75
Smg1Q8BKX6 Mrpl24-204ENSMUST00000121920 1115 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Smg1Q8BKX6 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC10.38□□□□□ -0.75
Smg1Q8BKX6 1700025F24Rik-201ENSMUST00000185238 894 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Smg1Q8BKX6 Gm5870-201ENSMUST00000196461 282 ntBASIC10.38□□□□□ -0.75
Smg1Q8BKX6 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC10.38□□□□□ -0.75
Smg1Q8BKX6 Tff2-201ENSMUST00000024826 584 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Smg1Q8BKX6 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Smg1Q8BKX6 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Smg1Q8BKX6 Lin37-202ENSMUST00000108164 1312 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Smg1Q8BKX6 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Smg1Q8BKX6 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Smg1Q8BKX6 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Smg1Q8BKX6 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC10.38□□□□□ -0.75
Smg1Q8BKX6 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Smg1Q8BKX6 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Smg1Q8BKX6 Opn1mw-202ENSMUST00000101457 1233 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Smg1Q8BKX6 Gm23255-201ENSMUST00000102244 110 ntBASIC10.38□□□□□ -0.75
Smg1Q8BKX6 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC10.38□□□□□ -0.75
Smg1Q8BKX6 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC10.38□□□□□ -0.75
Smg1Q8BKX6 Gm12682-201ENSMUST00000144637 1081 ntTSL 5 BASIC10.38□□□□□ -0.75
Smg1Q8BKX6 Nmbr-206ENSMUST00000190114 662 ntTSL 3 BASIC10.38□□□□□ -0.75
Smg1Q8BKX6 Tnfsf13b-201ENSMUST00000033892 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Smg1Q8BKX6 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Smg1Q8BKX6 Gm5805-201ENSMUST00000072779 456 ntBASIC10.38□□□□□ -0.75
Smg1Q8BKX6 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Smg1Q8BKX6 Gm37861-201ENSMUST00000193534 2869 ntBASIC10.38□□□□□ -0.75
Smg1Q8BKX6 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Smg1Q8BKX6 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Smg1Q8BKX6 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Smg1Q8BKX6 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Smg1Q8BKX6 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Smg1Q8BKX6 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Smg1Q8BKX6 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
Smg1Q8BKX6 Dnajb6-203ENSMUST00000114839 1605 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Smg1Q8BKX6 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC10.37□□□□□ -0.75
Smg1Q8BKX6 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Smg1Q8BKX6 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC10.37□□□□□ -0.75
Smg1Q8BKX6 Rps10-202ENSMUST00000114881 604 ntAPPRIS P1 TSL 3 BASIC10.37□□□□□ -0.75
Smg1Q8BKX6 Gm11989-201ENSMUST00000117240 672 ntBASIC10.37□□□□□ -0.75
Smg1Q8BKX6 Gm11362-201ENSMUST00000118838 850 ntBASIC10.37□□□□□ -0.75
Smg1Q8BKX6 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC10.37□□□□□ -0.75
Smg1Q8BKX6 Gm37707-201ENSMUST00000195309 325 ntTSL 3 BASIC10.37□□□□□ -0.75
Smg1Q8BKX6 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Smg1Q8BKX6 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Smg1Q8BKX6 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Smg1Q8BKX6 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Smg1Q8BKX6 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Smg1Q8BKX6 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Smg1Q8BKX6 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC10.37□□□□□ -0.75
Smg1Q8BKX6 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Smg1Q8BKX6 4930486L24Rik-201ENSMUST00000091569 1432 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Smg1Q8BKX6 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Smg1Q8BKX6 Tnnt3-206ENSMUST00000105944 753 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Smg1Q8BKX6 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Smg1Q8BKX6 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
Smg1Q8BKX6 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
Smg1Q8BKX6 Gm8451-201ENSMUST00000170338 447 ntBASIC10.37□□□□□ -0.75
Smg1Q8BKX6 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
Smg1Q8BKX6 Psmb6-201ENSMUST00000018430 798 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Smg1Q8BKX6 Olfr1347-205ENSMUST00000220413 964 ntBASIC10.37□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 41.9 ms