Protein–RNA interactions for Protein: Q8BGH2

Samm50, Sorting and assembly machinery component 50 homolog, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Samm50Q8BGH2 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC14.82□□□□□ -0.04
Samm50Q8BGH2 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Samm50Q8BGH2 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Samm50Q8BGH2 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Samm50Q8BGH2 Gm43438-201ENSMUST00000198133 379 ntBASIC14.82□□□□□ -0.04
Samm50Q8BGH2 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC14.82□□□□□ -0.04
Samm50Q8BGH2 AC134254.1-201ENSMUST00000221362 167 ntBASIC14.82□□□□□ -0.04
Samm50Q8BGH2 Gm2824-203ENSMUST00000226189 1228 ntBASIC14.82□□□□□ -0.04
Samm50Q8BGH2 AC140451.2-201ENSMUST00000228030 664 ntBASIC14.82□□□□□ -0.04
Samm50Q8BGH2 AC154276.1-201ENSMUST00000228874 1299 ntBASIC14.82□□□□□ -0.04
Samm50Q8BGH2 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Samm50Q8BGH2 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Samm50Q8BGH2 AC164702.1-201ENSMUST00000220135 2212 ntBASIC14.82□□□□□ -0.04
Samm50Q8BGH2 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Samm50Q8BGH2 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Samm50Q8BGH2 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC14.82□□□□□ -0.04
Samm50Q8BGH2 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC14.82□□□□□ -0.04
Samm50Q8BGH2 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Samm50Q8BGH2 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Samm50Q8BGH2 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Samm50Q8BGH2 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Samm50Q8BGH2 Gm45684-201ENSMUST00000210244 1571 ntBASIC14.81□□□□□ -0.04
Samm50Q8BGH2 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Samm50Q8BGH2 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Samm50Q8BGH2 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Samm50Q8BGH2 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Samm50Q8BGH2 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Samm50Q8BGH2 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC14.81□□□□□ -0.04
Samm50Q8BGH2 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC14.81□□□□□ -0.04
Samm50Q8BGH2 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Samm50Q8BGH2 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Samm50Q8BGH2 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC14.81□□□□□ -0.04
Samm50Q8BGH2 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Samm50Q8BGH2 Gm37497-201ENSMUST00000195830 798 ntBASIC14.81□□□□□ -0.04
Samm50Q8BGH2 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC14.81□□□□□ -0.04
Samm50Q8BGH2 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Samm50Q8BGH2 AC138604.1-201ENSMUST00000226969 739 ntBASIC14.81□□□□□ -0.04
Samm50Q8BGH2 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Samm50Q8BGH2 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Samm50Q8BGH2 Gm18263-201ENSMUST00000220846 1928 ntBASIC14.81□□□□□ -0.04
Samm50Q8BGH2 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC14.81□□□□□ -0.04
Samm50Q8BGH2 Gm44094-201ENSMUST00000204703 2030 ntBASIC14.81□□□□□ -0.04
Samm50Q8BGH2 Gm7553-201ENSMUST00000185805 1426 ntBASIC14.81□□□□□ -0.04
Samm50Q8BGH2 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Samm50Q8BGH2 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Samm50Q8BGH2 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Samm50Q8BGH2 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Samm50Q8BGH2 Gm7104-201ENSMUST00000179741 2532 ntBASIC14.81□□□□□ -0.04
Samm50Q8BGH2 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Samm50Q8BGH2 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Samm50Q8BGH2 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Samm50Q8BGH2 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC14.8□□□□□ -0.04
Samm50Q8BGH2 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC14.8□□□□□ -0.04
Samm50Q8BGH2 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Samm50Q8BGH2 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Samm50Q8BGH2 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Samm50Q8BGH2 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Samm50Q8BGH2 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Samm50Q8BGH2 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Samm50Q8BGH2 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Samm50Q8BGH2 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Samm50Q8BGH2 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Samm50Q8BGH2 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC14.8□□□□□ -0.04
Samm50Q8BGH2 Gm12957-201ENSMUST00000117835 377 ntBASIC14.8□□□□□ -0.04
Samm50Q8BGH2 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC14.8□□□□□ -0.04
Samm50Q8BGH2 Gm8565-201ENSMUST00000183259 1014 ntBASIC14.8□□□□□ -0.04
Samm50Q8BGH2 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Samm50Q8BGH2 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC14.8□□□□□ -0.04
Samm50Q8BGH2 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Samm50Q8BGH2 Gm10146-201ENSMUST00000072739 309 ntBASIC14.8□□□□□ -0.04
Samm50Q8BGH2 Gm43051-201ENSMUST00000201096 2678 ntBASIC14.8□□□□□ -0.04
Samm50Q8BGH2 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Samm50Q8BGH2 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Samm50Q8BGH2 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Samm50Q8BGH2 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Samm50Q8BGH2 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Samm50Q8BGH2 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Samm50Q8BGH2 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC14.8□□□□□ -0.04
Samm50Q8BGH2 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Samm50Q8BGH2 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Samm50Q8BGH2 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Samm50Q8BGH2 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Samm50Q8BGH2 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Samm50Q8BGH2 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Samm50Q8BGH2 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Samm50Q8BGH2 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Samm50Q8BGH2 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Samm50Q8BGH2 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Samm50Q8BGH2 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Samm50Q8BGH2 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Samm50Q8BGH2 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Samm50Q8BGH2 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Samm50Q8BGH2 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Samm50Q8BGH2 Gm8805-201ENSMUST00000117848 313 ntBASIC14.79□□□□□ -0.04
Samm50Q8BGH2 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Samm50Q8BGH2 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC14.79□□□□□ -0.04
Samm50Q8BGH2 Snora78-201ENSMUST00000158630 128 ntBASIC14.79□□□□□ -0.04
Samm50Q8BGH2 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC14.79□□□□□ -0.04
Samm50Q8BGH2 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Samm50Q8BGH2 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC14.79□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 65.5 ms