Protein–RNA interactions for Protein: Q811S7

Ubp1, Upstream-binding protein 1, mousemouse

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1Q811S7 Zkscan3-207ENSMUST00000223831 2101 ntBASIC12.51□□□□□ -0.41
Ubp1Q811S7 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ubp1Q811S7 n-R5s195-201ENSMUST00000082891 119 ntBASIC12.51□□□□□ -0.41
Ubp1Q811S7 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Ubp1Q811S7 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ubp1Q811S7 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Ubp1Q811S7 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Ubp1Q811S7 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ubp1Q811S7 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ubp1Q811S7 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Ubp1Q811S7 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ubp1Q811S7 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ubp1Q811S7 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC12.51□□□□□ -0.41
Ubp1Q811S7 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ubp1Q811S7 Gm6992-201ENSMUST00000217973 1607 ntBASIC12.51□□□□□ -0.41
Ubp1Q811S7 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Ubp1Q811S7 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC12.51□□□□□ -0.41
Ubp1Q811S7 Ssr1-203ENSMUST00000225246 1825 ntBASIC12.51□□□□□ -0.41
Ubp1Q811S7 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ubp1Q811S7 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ubp1Q811S7 AC153366.2-201ENSMUST00000219461 1984 ntBASIC12.5□□□□□ -0.41
Ubp1Q811S7 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ubp1Q811S7 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC12.5□□□□□ -0.41
Ubp1Q811S7 Gm3052-202ENSMUST00000188254 2224 ntBASIC12.5□□□□□ -0.41
Ubp1Q811S7 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Ubp1Q811S7 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ubp1Q811S7 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ubp1Q811S7 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Ubp1Q811S7 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ubp1Q811S7 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Ubp1Q811S7 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Ubp1Q811S7 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC12.5□□□□□ -0.41
Ubp1Q811S7 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ubp1Q811S7 Gm9431-201ENSMUST00000119765 1051 ntBASIC12.5□□□□□ -0.41
Ubp1Q811S7 4931428L18Rik-202ENSMUST00000135245 889 ntAPPRIS P5 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ubp1Q811S7 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ubp1Q811S7 Gm17420-201ENSMUST00000164753 153 ntBASIC12.5□□□□□ -0.41
Ubp1Q811S7 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC12.5□□□□□ -0.41
Ubp1Q811S7 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC12.5□□□□□ -0.41
Ubp1Q811S7 Gm37436-201ENSMUST00000193842 1085 ntBASIC12.5□□□□□ -0.41
Ubp1Q811S7 Gm19184-201ENSMUST00000196798 928 ntBASIC12.5□□□□□ -0.41
Ubp1Q811S7 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Ubp1Q811S7 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Ubp1Q811S7 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Ubp1Q811S7 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Ubp1Q811S7 Adipoq-201ENSMUST00000023593 1292 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ubp1Q811S7 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ubp1Q811S7 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ubp1Q811S7 Olfr1212-201ENSMUST00000055895 936 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Ubp1Q811S7 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ubp1Q811S7 Gm9200-201ENSMUST00000118513 1354 ntBASIC12.5□□□□□ -0.41
Ubp1Q811S7 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Ubp1Q811S7 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ubp1Q811S7 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC12.5□□□□□ -0.41
Ubp1Q811S7 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ubp1Q811S7 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ubp1Q811S7 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ubp1Q811S7 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC12.5□□□□□ -0.41
Ubp1Q811S7 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ubp1Q811S7 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC12.5□□□□□ -0.41
Ubp1Q811S7 Nrf1-206ENSMUST00000115204 2047 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Ubp1Q811S7 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ubp1Q811S7 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC12.5□□□□□ -0.41
Ubp1Q811S7 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ubp1Q811S7 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ubp1Q811S7 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ubp1Q811S7 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ubp1Q811S7 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ubp1Q811S7 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Ubp1Q811S7 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ubp1Q811S7 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC12.5□□□□□ -0.41
Ubp1Q811S7 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ubp1Q811S7 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Ubp1Q811S7 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ubp1Q811S7 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC12.49□□□□□ -0.41
Ubp1Q811S7 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ubp1Q811S7 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ubp1Q811S7 Gm10305-201ENSMUST00000195331 2475 ntBASIC12.49□□□□□ -0.41
Ubp1Q811S7 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Ubp1Q811S7 Gm43045-201ENSMUST00000198725 2095 ntBASIC12.49□□□□□ -0.41
Ubp1Q811S7 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Ubp1Q811S7 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ubp1Q811S7 Gm45251-201ENSMUST00000209486 1465 ntBASIC12.49□□□□□ -0.41
Ubp1Q811S7 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Ubp1Q811S7 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ubp1Q811S7 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC12.49□□□□□ -0.41
Ubp1Q811S7 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ubp1Q811S7 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ubp1Q811S7 B430010I23Rik-202ENSMUST00000152188 1168 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Ubp1Q811S7 Gm23757-201ENSMUST00000158353 100 ntBASIC12.49□□□□□ -0.41
Ubp1Q811S7 Gm16379-201ENSMUST00000161469 348 ntBASIC12.49□□□□□ -0.41
Ubp1Q811S7 Gm8738-201ENSMUST00000172606 329 ntBASIC12.49□□□□□ -0.41
Ubp1Q811S7 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Ubp1Q811S7 Gm8762-201ENSMUST00000193486 339 ntBASIC12.49□□□□□ -0.41
Ubp1Q811S7 Gm18584-201ENSMUST00000203098 964 ntBASIC12.49□□□□□ -0.41
Ubp1Q811S7 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC12.49□□□□□ -0.41
Ubp1Q811S7 AC155266.1-201ENSMUST00000220762 904 ntBASIC12.49□□□□□ -0.41
Ubp1Q811S7 AC125350.2-201ENSMUST00000224737 727 ntBASIC12.49□□□□□ -0.41
Ubp1Q811S7 AC140406.1-201ENSMUST00000226481 465 ntBASIC12.49□□□□□ -0.41
Ubp1Q811S7 AC093022.5-201ENSMUST00000226841 1079 ntBASIC12.49□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 41 ms