Protein–RNA interactions for Protein: Q80X53

Ccdc116, Coiled-coil domain-containing protein 116, mousemouse

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc116Q80X53 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ccdc116Q80X53 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Ccdc116Q80X53 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Ccdc116Q80X53 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ccdc116Q80X53 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ccdc116Q80X53 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC12.38□□□□□ -0.43
Ccdc116Q80X53 Nupl1-206ENSMUST00000225111 2936 ntBASIC12.38□□□□□ -0.43
Ccdc116Q80X53 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ccdc116Q80X53 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Ccdc116Q80X53 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ccdc116Q80X53 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ccdc116Q80X53 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC12.38□□□□□ -0.43
Ccdc116Q80X53 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ccdc116Q80X53 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC12.38□□□□□ -0.43
Ccdc116Q80X53 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ccdc116Q80X53 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC12.38□□□□□ -0.43
Ccdc116Q80X53 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC12.38□□□□□ -0.43
Ccdc116Q80X53 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ccdc116Q80X53 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Ccdc116Q80X53 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ccdc116Q80X53 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC12.38□□□□□ -0.43
Ccdc116Q80X53 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
Ccdc116Q80X53 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC12.38□□□□□ -0.43
Ccdc116Q80X53 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC12.38□□□□□ -0.43
Ccdc116Q80X53 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Ccdc116Q80X53 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Ccdc116Q80X53 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC12.38□□□□□ -0.43
Ccdc116Q80X53 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC12.38□□□□□ -0.43
Ccdc116Q80X53 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC12.38□□□□□ -0.43
Ccdc116Q80X53 Gm44799-201ENSMUST00000207639 1202 ntBASIC12.38□□□□□ -0.43
Ccdc116Q80X53 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ccdc116Q80X53 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Ccdc116Q80X53 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC12.38□□□□□ -0.43
Ccdc116Q80X53 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC12.38□□□□□ -0.43
Ccdc116Q80X53 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ccdc116Q80X53 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ccdc116Q80X53 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Ccdc116Q80X53 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ccdc116Q80X53 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Ccdc116Q80X53 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ccdc116Q80X53 Gm8706-201ENSMUST00000197372 1491 ntBASIC12.38□□□□□ -0.43
Ccdc116Q80X53 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ccdc116Q80X53 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Ccdc116Q80X53 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC12.38□□□□□ -0.43
Ccdc116Q80X53 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Ccdc116Q80X53 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Ccdc116Q80X53 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Ccdc116Q80X53 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ccdc116Q80X53 Gm37269-201ENSMUST00000193906 1891 ntBASIC12.38□□□□□ -0.43
Ccdc116Q80X53 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ccdc116Q80X53 Gm42941-201ENSMUST00000200347 1321 ntBASIC12.37□□□□□ -0.43
Ccdc116Q80X53 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ccdc116Q80X53 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ccdc116Q80X53 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ccdc116Q80X53 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Ccdc116Q80X53 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ccdc116Q80X53 D030068K23Rik-201ENSMUST00000180382 2617 ntTSL 2 BASIC12.37□□□□□ -0.43
Ccdc116Q80X53 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Ccdc116Q80X53 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ccdc116Q80X53 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Ccdc116Q80X53 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Ccdc116Q80X53 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC12.37□□□□□ -0.43
Ccdc116Q80X53 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC12.37□□□□□ -0.43
Ccdc116Q80X53 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC12.37□□□□□ -0.43
Ccdc116Q80X53 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ccdc116Q80X53 Gm26927-201ENSMUST00000182385 965 ntBASIC12.37□□□□□ -0.43
Ccdc116Q80X53 Gm29649-201ENSMUST00000185649 419 ntBASIC12.37□□□□□ -0.43
Ccdc116Q80X53 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Ccdc116Q80X53 Tyms-ps-201ENSMUST00000219550 915 ntBASIC12.37□□□□□ -0.43
Ccdc116Q80X53 AC022775.2-201ENSMUST00000227885 646 ntBASIC12.37□□□□□ -0.43
Ccdc116Q80X53 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC12.37□□□□□ -0.43
Ccdc116Q80X53 Gm8131-201ENSMUST00000213783 1570 ntBASIC12.37□□□□□ -0.43
Ccdc116Q80X53 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC12.37□□□□□ -0.43
Ccdc116Q80X53 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ccdc116Q80X53 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ccdc116Q80X53 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ccdc116Q80X53 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ccdc116Q80X53 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Ccdc116Q80X53 CT025624.1-201ENSMUST00000224007 2700 ntBASIC12.37□□□□□ -0.43
Ccdc116Q80X53 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC12.37□□□□□ -0.43
Ccdc116Q80X53 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ccdc116Q80X53 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ccdc116Q80X53 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ccdc116Q80X53 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ccdc116Q80X53 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Ccdc116Q80X53 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ccdc116Q80X53 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ccdc116Q80X53 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Ccdc116Q80X53 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Ccdc116Q80X53 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Ccdc116Q80X53 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Ccdc116Q80X53 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ccdc116Q80X53 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ccdc116Q80X53 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ccdc116Q80X53 Gm36970-201ENSMUST00000193688 1859 ntBASIC12.36□□□□□ -0.43
Ccdc116Q80X53 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ccdc116Q80X53 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Ccdc116Q80X53 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Ccdc116Q80X53 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Ccdc116Q80X53 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC12.36□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 52.4 ms