Protein–RNA interactions for Protein: Q80U87

Usp8, Ubiquitin carboxyl-terminal hydrolase 8, mousemouse

Predictions only

Length 1,080 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp8Q80U87 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Usp8Q80U87 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Usp8Q80U87 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC12.7□□□□□ -0.38
Usp8Q80U87 Gm8598-201ENSMUST00000221184 836 ntBASIC12.7□□□□□ -0.38
Usp8Q80U87 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Usp8Q80U87 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Usp8Q80U87 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Usp8Q80U87 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Usp8Q80U87 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Usp8Q80U87 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Usp8Q80U87 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Usp8Q80U87 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC12.7□□□□□ -0.38
Usp8Q80U87 Gm44094-201ENSMUST00000204703 2030 ntBASIC12.7□□□□□ -0.38
Usp8Q80U87 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Usp8Q80U87 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Usp8Q80U87 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Usp8Q80U87 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Usp8Q80U87 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC12.7□□□□□ -0.38
Usp8Q80U87 AC241621.2-201ENSMUST00000223991 2151 ntBASIC12.7□□□□□ -0.38
Usp8Q80U87 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Usp8Q80U87 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Usp8Q80U87 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Usp8Q80U87 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Usp8Q80U87 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC12.69□□□□□ -0.38
Usp8Q80U87 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Usp8Q80U87 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Usp8Q80U87 Gm38049-201ENSMUST00000195698 1372 ntBASIC12.69□□□□□ -0.38
Usp8Q80U87 AL645783.1-201ENSMUST00000221416 1832 ntBASIC12.69□□□□□ -0.38
Usp8Q80U87 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Usp8Q80U87 Utp23-203ENSMUST00000137116 2921 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Usp8Q80U87 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Usp8Q80U87 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Usp8Q80U87 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Usp8Q80U87 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Usp8Q80U87 Tmem132a-201ENSMUST00000025645 3657 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Usp8Q80U87 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Usp8Q80U87 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Usp8Q80U87 Tmem41b-202ENSMUST00000118429 2774 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Usp8Q80U87 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Usp8Q80U87 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Usp8Q80U87 Gm13612-201ENSMUST00000119276 390 ntBASIC12.69□□□□□ -0.38
Usp8Q80U87 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC12.69□□□□□ -0.38
Usp8Q80U87 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC12.69□□□□□ -0.38
Usp8Q80U87 Gtpbp10-211ENSMUST00000198799 648 ntBASIC12.69□□□□□ -0.38
Usp8Q80U87 Ighv8-10-201ENSMUST00000199579 358 ntBASIC12.69□□□□□ -0.38
Usp8Q80U87 Gm38671-201ENSMUST00000200573 130 ntBASIC12.69□□□□□ -0.38
Usp8Q80U87 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Usp8Q80U87 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Usp8Q80U87 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC12.69□□□□□ -0.38
Usp8Q80U87 AC150560.1-201ENSMUST00000227731 1187 ntBASIC12.69□□□□□ -0.38
Usp8Q80U87 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Usp8Q80U87 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Usp8Q80U87 Gm6180-201ENSMUST00000065243 498 ntBASIC12.69□□□□□ -0.38
Usp8Q80U87 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC12.69□□□□□ -0.38
Usp8Q80U87 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC12.69□□□□□ -0.38
Usp8Q80U87 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Usp8Q80U87 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Usp8Q80U87 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Usp8Q80U87 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC12.69□□□□□ -0.38
Usp8Q80U87 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Usp8Q80U87 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Usp8Q80U87 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
Usp8Q80U87 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC12.69□□□□□ -0.38
Usp8Q80U87 AI314180-202ENSMUST00000102889 7045 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Usp8Q80U87 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Usp8Q80U87 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Usp8Q80U87 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC12.69□□□□□ -0.38
Usp8Q80U87 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Usp8Q80U87 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Usp8Q80U87 Gm28323-201ENSMUST00000186817 2499 ntBASIC12.68□□□□□ -0.38
Usp8Q80U87 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC12.68□□□□□ -0.38
Usp8Q80U87 Gm37014-201ENSMUST00000194723 2253 ntBASIC12.68□□□□□ -0.38
Usp8Q80U87 Gm9115-201ENSMUST00000120192 1348 ntBASIC12.68□□□□□ -0.38
Usp8Q80U87 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Usp8Q80U87 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Usp8Q80U87 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Usp8Q80U87 Mir692-1-201ENSMUST00000102263 109 ntBASIC12.68□□□□□ -0.38
Usp8Q80U87 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Usp8Q80U87 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC12.68□□□□□ -0.38
Usp8Q80U87 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Usp8Q80U87 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Usp8Q80U87 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC12.68□□□□□ -0.38
Usp8Q80U87 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Usp8Q80U87 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Usp8Q80U87 Gm28693-202ENSMUST00000190758 331 ntBASIC12.68□□□□□ -0.38
Usp8Q80U87 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Usp8Q80U87 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Usp8Q80U87 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Usp8Q80U87 AC154305.4-201ENSMUST00000224520 614 ntBASIC12.68□□□□□ -0.38
Usp8Q80U87 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Usp8Q80U87 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Usp8Q80U87 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Usp8Q80U87 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC12.68□□□□□ -0.38
Usp8Q80U87 Gm6211-201ENSMUST00000147973 4275 ntBASIC12.68□□□□□ -0.38
Usp8Q80U87 Plekhg2-201ENSMUST00000094644 4623 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Usp8Q80U87 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Usp8Q80U87 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC12.68□□□□□ -0.38
Usp8Q80U87 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Usp8Q80U87 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Usp8Q80U87 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms