Protein–RNA interactions for Protein: Q80TP3

Ubr5, E3 ubiquitin-protein ligase UBR5, mousemouse

Predictions only

Length 2,792 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr5Q80TP3 Cabcoco1-201ENSMUST00000020103 1262 ntAPPRIS P2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Ubr5Q80TP3 Gm44506-201ENSMUST00000206278 965 ntBASIC10.64□□□□□ -0.71
Ubr5Q80TP3 Gm44647-201ENSMUST00000207402 428 ntBASIC10.64□□□□□ -0.71
Ubr5Q80TP3 3110009M11Rik-201ENSMUST00000208647 892 ntBASIC10.64□□□□□ -0.71
Ubr5Q80TP3 Gm8342-201ENSMUST00000209839 757 ntBASIC10.64□□□□□ -0.71
Ubr5Q80TP3 Gm5537-201ENSMUST00000091117 1252 ntBASIC10.64□□□□□ -0.71
Ubr5Q80TP3 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Ubr5Q80TP3 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Ubr5Q80TP3 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Ubr5Q80TP3 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Ubr5Q80TP3 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Ubr5Q80TP3 Asz1-201ENSMUST00000010940 1736 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Ubr5Q80TP3 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Ubr5Q80TP3 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Ubr5Q80TP3 Abi2-205ENSMUST00000187709 1671 ntAPPRIS P1 TSL 5 BASIC10.64□□□□□ -0.71
Ubr5Q80TP3 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Ubr5Q80TP3 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Ubr5Q80TP3 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Ubr5Q80TP3 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC10.64□□□□□ -0.71
Ubr5Q80TP3 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC10.64□□□□□ -0.71
Ubr5Q80TP3 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Ubr5Q80TP3 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC10.64□□□□□ -0.71
Ubr5Q80TP3 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Ubr5Q80TP3 Gm12756-201ENSMUST00000126294 599 ntTSL 3 BASIC10.64□□□□□ -0.71
Ubr5Q80TP3 Gm11884-201ENSMUST00000131639 641 ntTSL 5 BASIC10.64□□□□□ -0.71
Ubr5Q80TP3 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Ubr5Q80TP3 Vmn1r44-201ENSMUST00000089420 1108 ntAPPRIS P1 BASIC10.64□□□□□ -0.71
Ubr5Q80TP3 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Ubr5Q80TP3 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Ubr5Q80TP3 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Ubr5Q80TP3 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Ubr5Q80TP3 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Ubr5Q80TP3 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Ubr5Q80TP3 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Ubr5Q80TP3 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Ubr5Q80TP3 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC10.63□□□□□ -0.71
Ubr5Q80TP3 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC10.63□□□□□ -0.71
Ubr5Q80TP3 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Ubr5Q80TP3 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Ubr5Q80TP3 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Ubr5Q80TP3 AC173482.6-201ENSMUST00000225889 1741 ntBASIC10.63□□□□□ -0.71
Ubr5Q80TP3 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Ubr5Q80TP3 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Ubr5Q80TP3 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Ubr5Q80TP3 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Ubr5Q80TP3 Bcat2-208ENSMUST00000211173 1684 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Ubr5Q80TP3 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC10.63□□□□□ -0.71
Ubr5Q80TP3 Ighv1-50-201ENSMUST00000103521 390 ntAPPRIS P1 BASIC10.63□□□□□ -0.71
Ubr5Q80TP3 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC10.63□□□□□ -0.71
Ubr5Q80TP3 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC10.63□□□□□ -0.71
Ubr5Q80TP3 Gm11244-201ENSMUST00000121243 237 ntBASIC10.63□□□□□ -0.71
Ubr5Q80TP3 Gm26368-201ENSMUST00000157826 118 ntBASIC10.63□□□□□ -0.71
Ubr5Q80TP3 Gm25226-201ENSMUST00000158198 123 ntBASIC10.63□□□□□ -0.71
Ubr5Q80TP3 Gm3726-201ENSMUST00000203110 785 ntBASIC10.63□□□□□ -0.71
Ubr5Q80TP3 Gm36423-202ENSMUST00000222215 1298 ntTSL 5 BASIC10.63□□□□□ -0.71
Ubr5Q80TP3 Mir326-201ENSMUST00000083637 95 ntBASIC10.63□□□□□ -0.71
Ubr5Q80TP3 Gm6509-201ENSMUST00000098286 1218 ntTSL 5 BASIC10.63□□□□□ -0.71
Ubr5Q80TP3 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Ubr5Q80TP3 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Ubr5Q80TP3 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Ubr5Q80TP3 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC10.63□□□□□ -0.71
Ubr5Q80TP3 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Ubr5Q80TP3 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Ubr5Q80TP3 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Ubr5Q80TP3 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Ubr5Q80TP3 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Ubr5Q80TP3 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Ubr5Q80TP3 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Ubr5Q80TP3 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC10.63□□□□□ -0.71
Ubr5Q80TP3 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Ubr5Q80TP3 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Ubr5Q80TP3 Rpl7a-201ENSMUST00000102898 914 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Ubr5Q80TP3 Trav13d-1-201ENSMUST00000103588 396 ntAPPRIS P1 BASIC10.63□□□□□ -0.71
Ubr5Q80TP3 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Ubr5Q80TP3 6530401F13Rik-201ENSMUST00000166971 1090 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Ubr5Q80TP3 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Ubr5Q80TP3 Gm6040-201ENSMUST00000095430 857 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Ubr5Q80TP3 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Ubr5Q80TP3 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Ubr5Q80TP3 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Ubr5Q80TP3 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Ubr5Q80TP3 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Ubr5Q80TP3 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Ubr5Q80TP3 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC10.62□□□□□ -0.71
Ubr5Q80TP3 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC10.62□□□□□ -0.71
Ubr5Q80TP3 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Ubr5Q80TP3 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Ubr5Q80TP3 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Ubr5Q80TP3 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Ubr5Q80TP3 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Ubr5Q80TP3 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Ubr5Q80TP3 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC10.62□□□□□ -0.71
Ubr5Q80TP3 Fam187b-203ENSMUST00000129773 1213 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Ubr5Q80TP3 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC10.62□□□□□ -0.71
Ubr5Q80TP3 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Ubr5Q80TP3 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Ubr5Q80TP3 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Ubr5Q80TP3 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Ubr5Q80TP3 Oc90-202ENSMUST00000079776 1670 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Ubr5Q80TP3 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 56.2 ms