Protein–RNA interactions for Protein: Q7TSK3

Pcdh8, Protocadherin-8, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh8Q7TSK3 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdh8Q7TSK3 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC12.49□□□□□ -0.41
Pcdh8Q7TSK3 Gm14726-201ENSMUST00000120623 896 ntBASIC12.49□□□□□ -0.41
Pcdh8Q7TSK3 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdh8Q7TSK3 Gm2546-201ENSMUST00000182630 991 ntBASIC12.49□□□□□ -0.41
Pcdh8Q7TSK3 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC12.49□□□□□ -0.41
Pcdh8Q7TSK3 Gm29199-201ENSMUST00000187766 775 ntBASIC12.49□□□□□ -0.41
Pcdh8Q7TSK3 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdh8Q7TSK3 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC12.49□□□□□ -0.41
Pcdh8Q7TSK3 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC12.49□□□□□ -0.41
Pcdh8Q7TSK3 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdh8Q7TSK3 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdh8Q7TSK3 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdh8Q7TSK3 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Pcdh8Q7TSK3 Gm22058-201ENSMUST00000083393 310 ntBASIC12.49□□□□□ -0.41
Pcdh8Q7TSK3 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC12.49□□□□□ -0.41
Pcdh8Q7TSK3 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdh8Q7TSK3 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdh8Q7TSK3 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdh8Q7TSK3 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Pcdh8Q7TSK3 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC12.49□□□□□ -0.41
Pcdh8Q7TSK3 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdh8Q7TSK3 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdh8Q7TSK3 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdh8Q7TSK3 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdh8Q7TSK3 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdh8Q7TSK3 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdh8Q7TSK3 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdh8Q7TSK3 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdh8Q7TSK3 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Pcdh8Q7TSK3 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdh8Q7TSK3 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdh8Q7TSK3 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdh8Q7TSK3 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdh8Q7TSK3 Gm43868-201ENSMUST00000205187 2114 ntBASIC12.49□□□□□ -0.41
Pcdh8Q7TSK3 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdh8Q7TSK3 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Pcdh8Q7TSK3 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdh8Q7TSK3 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdh8Q7TSK3 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdh8Q7TSK3 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdh8Q7TSK3 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdh8Q7TSK3 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdh8Q7TSK3 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdh8Q7TSK3 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdh8Q7TSK3 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdh8Q7TSK3 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdh8Q7TSK3 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdh8Q7TSK3 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Pcdh8Q7TSK3 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdh8Q7TSK3 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdh8Q7TSK3 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Pcdh8Q7TSK3 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC12.48□□□□□ -0.41
Pcdh8Q7TSK3 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdh8Q7TSK3 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Pcdh8Q7TSK3 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdh8Q7TSK3 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdh8Q7TSK3 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC12.48□□□□□ -0.41
Pcdh8Q7TSK3 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC12.48□□□□□ -0.41
Pcdh8Q7TSK3 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC12.48□□□□□ -0.41
Pcdh8Q7TSK3 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC12.48□□□□□ -0.41
Pcdh8Q7TSK3 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdh8Q7TSK3 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdh8Q7TSK3 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Pcdh8Q7TSK3 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Pcdh8Q7TSK3 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdh8Q7TSK3 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC12.48□□□□□ -0.41
Pcdh8Q7TSK3 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdh8Q7TSK3 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdh8Q7TSK3 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdh8Q7TSK3 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdh8Q7TSK3 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Pcdh8Q7TSK3 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdh8Q7TSK3 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC12.48□□□□□ -0.41
Pcdh8Q7TSK3 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdh8Q7TSK3 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Pcdh8Q7TSK3 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdh8Q7TSK3 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdh8Q7TSK3 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdh8Q7TSK3 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdh8Q7TSK3 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Pcdh8Q7TSK3 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC12.47□□□□□ -0.41
Pcdh8Q7TSK3 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdh8Q7TSK3 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Pcdh8Q7TSK3 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC12.47□□□□□ -0.41
Pcdh8Q7TSK3 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdh8Q7TSK3 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdh8Q7TSK3 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC12.47□□□□□ -0.41
Pcdh8Q7TSK3 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC12.47□□□□□ -0.41
Pcdh8Q7TSK3 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
Pcdh8Q7TSK3 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Pcdh8Q7TSK3 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Pcdh8Q7TSK3 Gm18916-201ENSMUST00000198264 1246 ntBASIC12.47□□□□□ -0.41
Pcdh8Q7TSK3 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC12.47□□□□□ -0.41
Pcdh8Q7TSK3 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Pcdh8Q7TSK3 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdh8Q7TSK3 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Pcdh8Q7TSK3 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Pcdh8Q7TSK3 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC12.47□□□□□ -0.41
Pcdh8Q7TSK3 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 82.1 ms