Protein–RNA interactions for Protein: Q7TSG2

Ctdp1, RNA polymerase II subunit A C-terminal domain phosphatase, mousemouse

Predictions only

Length 960 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdp1Q7TSG2 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ctdp1Q7TSG2 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ctdp1Q7TSG2 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Ctdp1Q7TSG2 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ctdp1Q7TSG2 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ctdp1Q7TSG2 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ctdp1Q7TSG2 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ctdp1Q7TSG2 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ctdp1Q7TSG2 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ctdp1Q7TSG2 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ctdp1Q7TSG2 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ctdp1Q7TSG2 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Ctdp1Q7TSG2 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Ctdp1Q7TSG2 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC13.78□□□□□ -0.2
Ctdp1Q7TSG2 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC13.78□□□□□ -0.2
Ctdp1Q7TSG2 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC13.78□□□□□ -0.2
Ctdp1Q7TSG2 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Ctdp1Q7TSG2 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Ctdp1Q7TSG2 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ctdp1Q7TSG2 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ctdp1Q7TSG2 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ctdp1Q7TSG2 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Ctdp1Q7TSG2 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ctdp1Q7TSG2 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC13.78□□□□□ -0.2
Ctdp1Q7TSG2 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ctdp1Q7TSG2 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ctdp1Q7TSG2 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ctdp1Q7TSG2 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Ctdp1Q7TSG2 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ctdp1Q7TSG2 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ctdp1Q7TSG2 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Ctdp1Q7TSG2 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ctdp1Q7TSG2 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ctdp1Q7TSG2 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ctdp1Q7TSG2 CT573086.2-201ENSMUST00000227277 4992 ntBASIC13.78□□□□□ -0.2
Ctdp1Q7TSG2 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Ctdp1Q7TSG2 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
Ctdp1Q7TSG2 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC13.77□□□□□ -0.2
Ctdp1Q7TSG2 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Ctdp1Q7TSG2 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.2
Ctdp1Q7TSG2 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Ctdp1Q7TSG2 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Ctdp1Q7TSG2 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC13.77□□□□□ -0.21
Ctdp1Q7TSG2 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ctdp1Q7TSG2 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ctdp1Q7TSG2 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC13.77□□□□□ -0.21
Ctdp1Q7TSG2 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC13.77□□□□□ -0.21
Ctdp1Q7TSG2 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC13.77□□□□□ -0.21
Ctdp1Q7TSG2 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Ctdp1Q7TSG2 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC13.77□□□□□ -0.21
Ctdp1Q7TSG2 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC13.77□□□□□ -0.21
Ctdp1Q7TSG2 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
Ctdp1Q7TSG2 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC13.77□□□□□ -0.21
Ctdp1Q7TSG2 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Ctdp1Q7TSG2 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Ctdp1Q7TSG2 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Ctdp1Q7TSG2 Gm38223-201ENSMUST00000194484 695 ntBASIC13.77□□□□□ -0.21
Ctdp1Q7TSG2 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Ctdp1Q7TSG2 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC13.77□□□□□ -0.21
Ctdp1Q7TSG2 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ctdp1Q7TSG2 AC162801.1-201ENSMUST00000220612 198 ntBASIC13.77□□□□□ -0.21
Ctdp1Q7TSG2 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ctdp1Q7TSG2 Abhd6-203ENSMUST00000225234 1958 ntBASIC13.77□□□□□ -0.21
Ctdp1Q7TSG2 AC159006.1-201ENSMUST00000226396 258 ntBASIC13.77□□□□□ -0.21
Ctdp1Q7TSG2 AC150560.1-201ENSMUST00000227731 1187 ntBASIC13.77□□□□□ -0.21
Ctdp1Q7TSG2 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ctdp1Q7TSG2 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ctdp1Q7TSG2 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ctdp1Q7TSG2 Gm9755-201ENSMUST00000032981 1356 ntBASIC13.77□□□□□ -0.21
Ctdp1Q7TSG2 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ctdp1Q7TSG2 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ctdp1Q7TSG2 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ctdp1Q7TSG2 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ctdp1Q7TSG2 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ctdp1Q7TSG2 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ctdp1Q7TSG2 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ctdp1Q7TSG2 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ctdp1Q7TSG2 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ctdp1Q7TSG2 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ctdp1Q7TSG2 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ctdp1Q7TSG2 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC13.77□□□□□ -0.21
Ctdp1Q7TSG2 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ctdp1Q7TSG2 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC13.76□□□□□ -0.21
Ctdp1Q7TSG2 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ctdp1Q7TSG2 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ctdp1Q7TSG2 Gm2420-201ENSMUST00000119864 2149 ntBASIC13.76□□□□□ -0.21
Ctdp1Q7TSG2 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ctdp1Q7TSG2 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ctdp1Q7TSG2 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC13.76□□□□□ -0.21
Ctdp1Q7TSG2 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Ctdp1Q7TSG2 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
Ctdp1Q7TSG2 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ctdp1Q7TSG2 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC13.76□□□□□ -0.21
Ctdp1Q7TSG2 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Ctdp1Q7TSG2 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Ctdp1Q7TSG2 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Ctdp1Q7TSG2 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ctdp1Q7TSG2 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC13.76□□□□□ -0.21
Ctdp1Q7TSG2 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Ctdp1Q7TSG2 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms