Protein–RNA interactions for Protein: Q6PIJ4

Nfrkb, Nuclear factor related to kappa-B-binding protein, mousemouse

Known RBP Predictions only

Length 1,296 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NfrkbQ6PIJ4 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
NfrkbQ6PIJ4 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
NfrkbQ6PIJ4 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
NfrkbQ6PIJ4 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
NfrkbQ6PIJ4 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
NfrkbQ6PIJ4 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
NfrkbQ6PIJ4 Gm12217-201ENSMUST00000118858 696 ntBASIC14.27□□□□□ -0.13
NfrkbQ6PIJ4 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC14.27□□□□□ -0.13
NfrkbQ6PIJ4 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC14.27□□□□□ -0.13
NfrkbQ6PIJ4 Gm22902-201ENSMUST00000158488 302 ntBASIC14.27□□□□□ -0.13
NfrkbQ6PIJ4 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.13
NfrkbQ6PIJ4 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
NfrkbQ6PIJ4 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
NfrkbQ6PIJ4 Gm6652-201ENSMUST00000186414 1070 ntBASIC14.27□□□□□ -0.13
NfrkbQ6PIJ4 Gm2453-202ENSMUST00000195508 568 ntTSL 3 BASIC14.27□□□□□ -0.13
NfrkbQ6PIJ4 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC14.27□□□□□ -0.13
NfrkbQ6PIJ4 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
NfrkbQ6PIJ4 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
NfrkbQ6PIJ4 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
NfrkbQ6PIJ4 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
NfrkbQ6PIJ4 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
NfrkbQ6PIJ4 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
NfrkbQ6PIJ4 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
NfrkbQ6PIJ4 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
NfrkbQ6PIJ4 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
NfrkbQ6PIJ4 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
NfrkbQ6PIJ4 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
NfrkbQ6PIJ4 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
NfrkbQ6PIJ4 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
NfrkbQ6PIJ4 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
NfrkbQ6PIJ4 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
NfrkbQ6PIJ4 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NfrkbQ6PIJ4 Gm2673-201ENSMUST00000120958 1608 ntBASIC14.26□□□□□ -0.13
NfrkbQ6PIJ4 Gm5385-201ENSMUST00000118988 1559 ntBASIC14.26□□□□□ -0.13
NfrkbQ6PIJ4 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
NfrkbQ6PIJ4 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
NfrkbQ6PIJ4 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
NfrkbQ6PIJ4 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NfrkbQ6PIJ4 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NfrkbQ6PIJ4 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
NfrkbQ6PIJ4 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
NfrkbQ6PIJ4 AC137842.1-201ENSMUST00000227896 2064 ntBASIC14.26□□□□□ -0.13
NfrkbQ6PIJ4 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
NfrkbQ6PIJ4 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NfrkbQ6PIJ4 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC14.26□□□□□ -0.13
NfrkbQ6PIJ4 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
NfrkbQ6PIJ4 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC14.26□□□□□ -0.13
NfrkbQ6PIJ4 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
NfrkbQ6PIJ4 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
NfrkbQ6PIJ4 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC14.26□□□□□ -0.13
NfrkbQ6PIJ4 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC14.26□□□□□ -0.13
NfrkbQ6PIJ4 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC14.26□□□□□ -0.13
NfrkbQ6PIJ4 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC14.26□□□□□ -0.13
NfrkbQ6PIJ4 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
NfrkbQ6PIJ4 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC14.26□□□□□ -0.13
NfrkbQ6PIJ4 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
NfrkbQ6PIJ4 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC14.26□□□□□ -0.13
NfrkbQ6PIJ4 AC123665.1-201ENSMUST00000228204 438 ntBASIC14.26□□□□□ -0.13
NfrkbQ6PIJ4 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
NfrkbQ6PIJ4 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NfrkbQ6PIJ4 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NfrkbQ6PIJ4 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NfrkbQ6PIJ4 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NfrkbQ6PIJ4 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
NfrkbQ6PIJ4 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
NfrkbQ6PIJ4 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
NfrkbQ6PIJ4 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NfrkbQ6PIJ4 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NfrkbQ6PIJ4 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NfrkbQ6PIJ4 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NfrkbQ6PIJ4 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
NfrkbQ6PIJ4 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
NfrkbQ6PIJ4 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NfrkbQ6PIJ4 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
NfrkbQ6PIJ4 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC14.25□□□□□ -0.13
NfrkbQ6PIJ4 Gm12566-201ENSMUST00000121479 359 ntBASIC14.25□□□□□ -0.13
NfrkbQ6PIJ4 Cep97-206ENSMUST00000122280 1057 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
NfrkbQ6PIJ4 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NfrkbQ6PIJ4 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
NfrkbQ6PIJ4 Fbxw4-203ENSMUST00000160003 387 ntTSL 3 BASIC14.25□□□□□ -0.13
NfrkbQ6PIJ4 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
NfrkbQ6PIJ4 Mir6927-201ENSMUST00000184494 71 ntBASIC14.25□□□□□ -0.13
NfrkbQ6PIJ4 Gm37201-201ENSMUST00000191845 523 ntBASIC14.25□□□□□ -0.13
NfrkbQ6PIJ4 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC14.25□□□□□ -0.13
NfrkbQ6PIJ4 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC14.25□□□□□ -0.13
NfrkbQ6PIJ4 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NfrkbQ6PIJ4 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
NfrkbQ6PIJ4 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NfrkbQ6PIJ4 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC14.25□□□□□ -0.13
NfrkbQ6PIJ4 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
NfrkbQ6PIJ4 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NfrkbQ6PIJ4 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC14.25□□□□□ -0.13
NfrkbQ6PIJ4 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NfrkbQ6PIJ4 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
NfrkbQ6PIJ4 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
NfrkbQ6PIJ4 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
NfrkbQ6PIJ4 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC14.25□□□□□ -0.13
NfrkbQ6PIJ4 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
NfrkbQ6PIJ4 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
NfrkbQ6PIJ4 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms