Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 Gm44260-201ENSMUST00000204946 2094 ntBASIC14.63□□□□□ -0.07
Nup98Q6PFD9 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Nup98Q6PFD9 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Nup98Q6PFD9 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Nup98Q6PFD9 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
Nup98Q6PFD9 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Nup98Q6PFD9 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Nup98Q6PFD9 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC14.63□□□□□ -0.07
Nup98Q6PFD9 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Nup98Q6PFD9 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Nup98Q6PFD9 Gm5847-201ENSMUST00000178959 1595 ntBASIC14.63□□□□□ -0.07
Nup98Q6PFD9 AC154671.1-201ENSMUST00000228617 1578 ntBASIC14.63□□□□□ -0.07
Nup98Q6PFD9 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Nup98Q6PFD9 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Nup98Q6PFD9 Cd27-203ENSMUST00000112282 588 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Nup98Q6PFD9 Gm13809-201ENSMUST00000117921 597 ntBASIC14.63□□□□□ -0.07
Nup98Q6PFD9 Gm16166-201ENSMUST00000118291 787 ntBASIC14.63□□□□□ -0.07
Nup98Q6PFD9 Gm11667-201ENSMUST00000119828 486 ntBASIC14.63□□□□□ -0.07
Nup98Q6PFD9 Gm16172-201ENSMUST00000156224 682 ntTSL 3 BASIC14.63□□□□□ -0.07
Nup98Q6PFD9 Snrpa-206ENSMUST00000163311 1288 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
Nup98Q6PFD9 Gm5706-201ENSMUST00000181525 993 ntBASIC14.63□□□□□ -0.07
Nup98Q6PFD9 Gm37835-201ENSMUST00000193305 361 ntBASIC14.63□□□□□ -0.07
Nup98Q6PFD9 Gm8956-201ENSMUST00000203939 825 ntBASIC14.63□□□□□ -0.07
Nup98Q6PFD9 Cryab-201ENSMUST00000034562 946 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Nup98Q6PFD9 Lcn8-201ENSMUST00000038482 651 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Nup98Q6PFD9 Cthrc1-201ENSMUST00000067072 1166 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Nup98Q6PFD9 Ntrk2-209ENSMUST00000225950 2640 ntBASIC14.63□□□□□ -0.07
Nup98Q6PFD9 Gm21998-201ENSMUST00000117552 1308 ntBASIC14.63□□□□□ -0.07
Nup98Q6PFD9 Sparc-209ENSMUST00000216313 1304 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Nup98Q6PFD9 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Nup98Q6PFD9 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC14.63□□□□□ -0.07
Nup98Q6PFD9 Gm37513-201ENSMUST00000194830 2268 ntBASIC14.63□□□□□ -0.07
Nup98Q6PFD9 Gm38378-201ENSMUST00000195153 2268 ntBASIC14.63□□□□□ -0.07
Nup98Q6PFD9 Fcna-201ENSMUST00000028307 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Nup98Q6PFD9 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC14.63□□□□□ -0.07
Nup98Q6PFD9 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Nup98Q6PFD9 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Nup98Q6PFD9 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Nup98Q6PFD9 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Nup98Q6PFD9 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Nup98Q6PFD9 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC14.62□□□□□ -0.07
Nup98Q6PFD9 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Nup98Q6PFD9 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Nup98Q6PFD9 Gm6397-201ENSMUST00000161973 1069 ntBASIC14.62□□□□□ -0.07
Nup98Q6PFD9 Mocs2-203ENSMUST00000164737 745 ntTSL 3 BASIC14.62□□□□□ -0.07
Nup98Q6PFD9 Sap25-201ENSMUST00000166099 1101 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Nup98Q6PFD9 9030616G12Rik-201ENSMUST00000181142 644 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Nup98Q6PFD9 Gm10731-201ENSMUST00000181171 448 ntBASIC14.62□□□□□ -0.07
Nup98Q6PFD9 Gm5732-201ENSMUST00000182596 1007 ntBASIC14.62□□□□□ -0.07
Nup98Q6PFD9 Ccser2-208ENSMUST00000183007 1293 ntTSL 5 BASIC14.62□□□□□ -0.07
Nup98Q6PFD9 Dusp13-211ENSMUST00000183943 779 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Nup98Q6PFD9 Mir7677-201ENSMUST00000184226 67 ntBASIC14.62□□□□□ -0.07
Nup98Q6PFD9 AC107638.1-201ENSMUST00000213690 1061 ntBASIC14.62□□□□□ -0.07
Nup98Q6PFD9 Gm40983-201ENSMUST00000222524 502 ntTSL 3 BASIC14.62□□□□□ -0.07
Nup98Q6PFD9 Fam151b-201ENSMUST00000040106 1152 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Nup98Q6PFD9 Lcn6-201ENSMUST00000059693 1254 ntTSL 5 BASIC14.62□□□□□ -0.07
Nup98Q6PFD9 Gm7551-201ENSMUST00000089593 1074 ntBASIC14.62□□□□□ -0.07
Nup98Q6PFD9 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC14.62□□□□□ -0.07
Nup98Q6PFD9 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Nup98Q6PFD9 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Nup98Q6PFD9 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Nup98Q6PFD9 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC14.62□□□□□ -0.07
Nup98Q6PFD9 Srsf5-202ENSMUST00000110351 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Nup98Q6PFD9 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Nup98Q6PFD9 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Nup98Q6PFD9 Gm45546-201ENSMUST00000211053 2394 ntBASIC14.62□□□□□ -0.07
Nup98Q6PFD9 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Nup98Q6PFD9 Gm14724-201ENSMUST00000118400 537 ntBASIC14.62□□□□□ -0.07
Nup98Q6PFD9 Gm9211-201ENSMUST00000182882 975 ntBASIC14.62□□□□□ -0.07
Nup98Q6PFD9 AC159819.2-201ENSMUST00000216151 342 ntBASIC14.62□□□□□ -0.07
Nup98Q6PFD9 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC14.62□□□□□ -0.07
Nup98Q6PFD9 Tead3-207ENSMUST00000219703 1320 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Nup98Q6PFD9 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC14.61□□□□□ -0.07
Nup98Q6PFD9 Cdc42ep2-201ENSMUST00000055458 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nup98Q6PFD9 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Nup98Q6PFD9 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Nup98Q6PFD9 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nup98Q6PFD9 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Nup98Q6PFD9 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nup98Q6PFD9 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nup98Q6PFD9 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nup98Q6PFD9 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC14.61□□□□□ -0.07
Nup98Q6PFD9 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nup98Q6PFD9 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nup98Q6PFD9 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC14.61□□□□□ -0.07
Nup98Q6PFD9 Cdk2ap1-202ENSMUST00000111472 648 ntAPPRIS ALT1 TSL 5 BASIC14.61□□□□□ -0.07
Nup98Q6PFD9 Ldha-ps2-201ENSMUST00000118722 1057 ntBASIC14.61□□□□□ -0.07
Nup98Q6PFD9 Gm11683-201ENSMUST00000147006 918 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Nup98Q6PFD9 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nup98Q6PFD9 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nup98Q6PFD9 C730034F03Rik-201ENSMUST00000168646 1280 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Nup98Q6PFD9 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Nup98Q6PFD9 Gm37437-201ENSMUST00000194451 1937 ntBASIC14.61□□□□□ -0.07
Nup98Q6PFD9 Gm43184-201ENSMUST00000197247 542 ntBASIC14.61□□□□□ -0.07
Nup98Q6PFD9 Gm45118-201ENSMUST00000208928 825 ntBASIC14.61□□□□□ -0.07
Nup98Q6PFD9 Gm4157-201ENSMUST00000211647 679 ntBASIC14.61□□□□□ -0.07
Nup98Q6PFD9 Tepp-207ENSMUST00000212056 613 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Nup98Q6PFD9 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nup98Q6PFD9 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nup98Q6PFD9 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 41.3 ms