Protein–RNA interactions for Protein: Q6NSQ5

Sp140, Sp140 nuclear body protein, mousemouse

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sp140Q6NSQ5 Gm8706-201ENSMUST00000197372 1491 ntBASIC12.81□□□□□ -0.36
Sp140Q6NSQ5 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC12.81□□□□□ -0.36
Sp140Q6NSQ5 Gm1335-201ENSMUST00000121653 386 ntBASIC12.81□□□□□ -0.36
Sp140Q6NSQ5 Gm14760-201ENSMUST00000121831 999 ntBASIC12.81□□□□□ -0.36
Sp140Q6NSQ5 Gm26927-201ENSMUST00000182385 965 ntBASIC12.81□□□□□ -0.36
Sp140Q6NSQ5 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC12.81□□□□□ -0.36
Sp140Q6NSQ5 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
Sp140Q6NSQ5 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC12.81□□□□□ -0.36
Sp140Q6NSQ5 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC12.81□□□□□ -0.36
Sp140Q6NSQ5 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC12.81□□□□□ -0.36
Sp140Q6NSQ5 Tyms-ps-201ENSMUST00000219550 915 ntBASIC12.81□□□□□ -0.36
Sp140Q6NSQ5 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sp140Q6NSQ5 Gm10268-201ENSMUST00000085340 555 ntBASIC12.81□□□□□ -0.36
Sp140Q6NSQ5 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Sp140Q6NSQ5 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC12.81□□□□□ -0.36
Sp140Q6NSQ5 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC12.81□□□□□ -0.36
Sp140Q6NSQ5 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC12.81□□□□□ -0.36
Sp140Q6NSQ5 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Sp140Q6NSQ5 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC12.81□□□□□ -0.36
Sp140Q6NSQ5 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sp140Q6NSQ5 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Sp140Q6NSQ5 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sp140Q6NSQ5 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Sp140Q6NSQ5 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sp140Q6NSQ5 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Sp140Q6NSQ5 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC12.8□□□□□ -0.36
Sp140Q6NSQ5 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sp140Q6NSQ5 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC12.8□□□□□ -0.36
Sp140Q6NSQ5 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Sp140Q6NSQ5 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sp140Q6NSQ5 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Sp140Q6NSQ5 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Sp140Q6NSQ5 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Sp140Q6NSQ5 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC12.8□□□□□ -0.36
Sp140Q6NSQ5 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Sp140Q6NSQ5 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC12.8□□□□□ -0.36
Sp140Q6NSQ5 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Sp140Q6NSQ5 Gm8602-201ENSMUST00000184045 607 ntBASIC12.8□□□□□ -0.36
Sp140Q6NSQ5 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
Sp140Q6NSQ5 Gm44124-201ENSMUST00000204159 472 ntBASIC12.8□□□□□ -0.36
Sp140Q6NSQ5 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC12.8□□□□□ -0.36
Sp140Q6NSQ5 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC12.8□□□□□ -0.36
Sp140Q6NSQ5 AC069562.3-201ENSMUST00000225387 587 ntBASIC12.8□□□□□ -0.36
Sp140Q6NSQ5 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sp140Q6NSQ5 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sp140Q6NSQ5 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Sp140Q6NSQ5 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sp140Q6NSQ5 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC12.8□□□□□ -0.36
Sp140Q6NSQ5 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC12.8□□□□□ -0.36
Sp140Q6NSQ5 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sp140Q6NSQ5 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Sp140Q6NSQ5 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sp140Q6NSQ5 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC12.8□□□□□ -0.36
Sp140Q6NSQ5 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Sp140Q6NSQ5 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sp140Q6NSQ5 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Sp140Q6NSQ5 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sp140Q6NSQ5 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Sp140Q6NSQ5 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sp140Q6NSQ5 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sp140Q6NSQ5 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sp140Q6NSQ5 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Sp140Q6NSQ5 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sp140Q6NSQ5 Gm15703-201ENSMUST00000120250 880 ntBASIC12.79□□□□□ -0.36
Sp140Q6NSQ5 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC12.79□□□□□ -0.36
Sp140Q6NSQ5 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Sp140Q6NSQ5 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sp140Q6NSQ5 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Sp140Q6NSQ5 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sp140Q6NSQ5 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sp140Q6NSQ5 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC12.79□□□□□ -0.36
Sp140Q6NSQ5 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sp140Q6NSQ5 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sp140Q6NSQ5 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC12.79□□□□□ -0.36
Sp140Q6NSQ5 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sp140Q6NSQ5 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sp140Q6NSQ5 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sp140Q6NSQ5 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Sp140Q6NSQ5 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sp140Q6NSQ5 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Sp140Q6NSQ5 Gm44241-201ENSMUST00000203230 1662 ntBASIC12.79□□□□□ -0.36
Sp140Q6NSQ5 Gm10339-203ENSMUST00000225409 1671 ntBASIC12.79□□□□□ -0.36
Sp140Q6NSQ5 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sp140Q6NSQ5 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sp140Q6NSQ5 Gm7224-201ENSMUST00000121359 2066 ntBASIC12.79□□□□□ -0.36
Sp140Q6NSQ5 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sp140Q6NSQ5 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Sp140Q6NSQ5 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sp140Q6NSQ5 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Sp140Q6NSQ5 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Sp140Q6NSQ5 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC12.78□□□□□ -0.36
Sp140Q6NSQ5 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Sp140Q6NSQ5 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Sp140Q6NSQ5 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Sp140Q6NSQ5 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Sp140Q6NSQ5 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Sp140Q6NSQ5 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Sp140Q6NSQ5 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Sp140Q6NSQ5 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC12.78□□□□□ -0.36
Sp140Q6NSQ5 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms