Protein–RNA interactions for Protein: Q6IRU2

Tpm4, Tropomyosin alpha-4 chain, mousemouse

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm4Q6IRU2 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Tpm4Q6IRU2 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
Tpm4Q6IRU2 Gm9061-201ENSMUST00000182707 1006 ntBASIC14.13□□□□□ -0.15
Tpm4Q6IRU2 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Tpm4Q6IRU2 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC14.13□□□□□ -0.15
Tpm4Q6IRU2 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC14.13□□□□□ -0.15
Tpm4Q6IRU2 Gm18473-201ENSMUST00000220543 868 ntBASIC14.13□□□□□ -0.15
Tpm4Q6IRU2 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC14.13□□□□□ -0.15
Tpm4Q6IRU2 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Tpm4Q6IRU2 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Tpm4Q6IRU2 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Tpm4Q6IRU2 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC14.13□□□□□ -0.15
Tpm4Q6IRU2 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Tpm4Q6IRU2 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC14.13□□□□□ -0.15
Tpm4Q6IRU2 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Tpm4Q6IRU2 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
Tpm4Q6IRU2 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Tpm4Q6IRU2 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Tpm4Q6IRU2 Trpv3-201ENSMUST00000049676 5835 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Tpm4Q6IRU2 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Tpm4Q6IRU2 Acoxl-201ENSMUST00000028859 2842 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Tpm4Q6IRU2 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC14.13□□□□□ -0.15
Tpm4Q6IRU2 CT025678.1-201ENSMUST00000214795 2972 ntBASIC14.13□□□□□ -0.15
Tpm4Q6IRU2 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Tpm4Q6IRU2 Gm44292-201ENSMUST00000205194 2364 ntBASIC14.12□□□□□ -0.15
Tpm4Q6IRU2 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Tpm4Q6IRU2 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Tpm4Q6IRU2 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Tpm4Q6IRU2 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Tpm4Q6IRU2 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC14.12□□□□□ -0.15
Tpm4Q6IRU2 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Tpm4Q6IRU2 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Tpm4Q6IRU2 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Tpm4Q6IRU2 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Tpm4Q6IRU2 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Tpm4Q6IRU2 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Tpm4Q6IRU2 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Tpm4Q6IRU2 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Tpm4Q6IRU2 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC14.12□□□□□ -0.15
Tpm4Q6IRU2 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC14.12□□□□□ -0.15
Tpm4Q6IRU2 Gm12539-201ENSMUST00000121549 1098 ntBASIC14.12□□□□□ -0.15
Tpm4Q6IRU2 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC14.12□□□□□ -0.15
Tpm4Q6IRU2 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC14.12□□□□□ -0.15
Tpm4Q6IRU2 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Tpm4Q6IRU2 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC14.12□□□□□ -0.15
Tpm4Q6IRU2 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC14.12□□□□□ -0.15
Tpm4Q6IRU2 Gm5276-201ENSMUST00000196683 1047 ntBASIC14.12□□□□□ -0.15
Tpm4Q6IRU2 Gm44064-201ENSMUST00000204964 1087 ntBASIC14.12□□□□□ -0.15
Tpm4Q6IRU2 Gm7446-201ENSMUST00000221035 1240 ntBASIC14.12□□□□□ -0.15
Tpm4Q6IRU2 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Tpm4Q6IRU2 Gm15823-201ENSMUST00000064305 670 ntBASIC14.12□□□□□ -0.15
Tpm4Q6IRU2 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Tpm4Q6IRU2 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC14.12□□□□□ -0.15
Tpm4Q6IRU2 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Tpm4Q6IRU2 Wdr26-208ENSMUST00000162963 6452 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Tpm4Q6IRU2 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Tpm4Q6IRU2 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Tpm4Q6IRU2 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Tpm4Q6IRU2 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Tpm4Q6IRU2 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Tpm4Q6IRU2 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Tpm4Q6IRU2 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Tpm4Q6IRU2 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Tpm4Q6IRU2 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Tpm4Q6IRU2 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Tpm4Q6IRU2 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Tpm4Q6IRU2 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Tpm4Q6IRU2 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Tpm4Q6IRU2 Erbin-201ENSMUST00000022222 6369 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Tpm4Q6IRU2 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Tpm4Q6IRU2 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Tpm4Q6IRU2 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Tpm4Q6IRU2 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC14.11□□□□□ -0.15
Tpm4Q6IRU2 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Tpm4Q6IRU2 Gm12859-201ENSMUST00000117834 427 ntBASIC14.11□□□□□ -0.15
Tpm4Q6IRU2 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Tpm4Q6IRU2 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Tpm4Q6IRU2 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC14.11□□□□□ -0.15
Tpm4Q6IRU2 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Tpm4Q6IRU2 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Tpm4Q6IRU2 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Tpm4Q6IRU2 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Tpm4Q6IRU2 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Tpm4Q6IRU2 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Tpm4Q6IRU2 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Tpm4Q6IRU2 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Tpm4Q6IRU2 Itga4-201ENSMUST00000099972 9767 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Tpm4Q6IRU2 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Tpm4Q6IRU2 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Tpm4Q6IRU2 Banp-204ENSMUST00000170857 5444 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Tpm4Q6IRU2 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Tpm4Q6IRU2 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Tpm4Q6IRU2 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Tpm4Q6IRU2 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Tpm4Q6IRU2 Gm27177-202ENSMUST00000183514 2703 ntBASIC14.11□□□□□ -0.15
Tpm4Q6IRU2 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Tpm4Q6IRU2 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC14.11□□□□□ -0.15
Tpm4Q6IRU2 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Tpm4Q6IRU2 Gm44806-201ENSMUST00000205574 2303 ntBASIC14.1□□□□□ -0.15
Tpm4Q6IRU2 Mroh1-201ENSMUST00000092595 5111 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 62.5 ms