Protein–RNA interactions for Protein: Q6IFX4

Krt39, Keratin, type I cytoskeletal 39, mousemouse

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt39Q6IFX4 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Krt39Q6IFX4 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Krt39Q6IFX4 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Krt39Q6IFX4 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Krt39Q6IFX4 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Krt39Q6IFX4 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC13.95□□□□□ -0.18
Krt39Q6IFX4 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Krt39Q6IFX4 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Krt39Q6IFX4 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Krt39Q6IFX4 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Krt39Q6IFX4 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Krt39Q6IFX4 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Krt39Q6IFX4 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Krt39Q6IFX4 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Krt39Q6IFX4 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC13.95□□□□□ -0.18
Krt39Q6IFX4 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Krt39Q6IFX4 Gm38157-201ENSMUST00000194178 1698 ntBASIC13.95□□□□□ -0.18
Krt39Q6IFX4 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Krt39Q6IFX4 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Krt39Q6IFX4 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Krt39Q6IFX4 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Krt39Q6IFX4 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Krt39Q6IFX4 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Krt39Q6IFX4 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Krt39Q6IFX4 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Krt39Q6IFX4 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Krt39Q6IFX4 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Krt39Q6IFX4 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Krt39Q6IFX4 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Krt39Q6IFX4 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC13.94□□□□□ -0.18
Krt39Q6IFX4 Gm16479-201ENSMUST00000121706 932 ntBASIC13.94□□□□□ -0.18
Krt39Q6IFX4 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Krt39Q6IFX4 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Krt39Q6IFX4 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Krt39Q6IFX4 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Krt39Q6IFX4 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Krt39Q6IFX4 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC13.94□□□□□ -0.18
Krt39Q6IFX4 Gm38671-201ENSMUST00000200573 130 ntBASIC13.94□□□□□ -0.18
Krt39Q6IFX4 AC134254.1-201ENSMUST00000221362 167 ntBASIC13.94□□□□□ -0.18
Krt39Q6IFX4 CT030657.3-201ENSMUST00000222707 1200 ntBASIC13.94□□□□□ -0.18
Krt39Q6IFX4 Cdk7-205ENSMUST00000225990 1159 ntBASIC13.94□□□□□ -0.18
Krt39Q6IFX4 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Krt39Q6IFX4 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Krt39Q6IFX4 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Krt39Q6IFX4 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC13.94□□□□□ -0.18
Krt39Q6IFX4 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Krt39Q6IFX4 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Krt39Q6IFX4 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Krt39Q6IFX4 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Krt39Q6IFX4 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Krt39Q6IFX4 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Krt39Q6IFX4 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Krt39Q6IFX4 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Krt39Q6IFX4 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Krt39Q6IFX4 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Krt39Q6IFX4 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Krt39Q6IFX4 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Krt39Q6IFX4 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Krt39Q6IFX4 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Krt39Q6IFX4 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Krt39Q6IFX4 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Krt39Q6IFX4 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Krt39Q6IFX4 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC13.93□□□□□ -0.18
Krt39Q6IFX4 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Krt39Q6IFX4 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Krt39Q6IFX4 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC13.93□□□□□ -0.18
Krt39Q6IFX4 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Krt39Q6IFX4 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Krt39Q6IFX4 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Krt39Q6IFX4 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC13.93□□□□□ -0.18
Krt39Q6IFX4 Gm14921-201ENSMUST00000118643 908 ntBASIC13.93□□□□□ -0.18
Krt39Q6IFX4 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Krt39Q6IFX4 Gm22121-201ENSMUST00000175148 54 ntBASIC13.93□□□□□ -0.18
Krt39Q6IFX4 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Krt39Q6IFX4 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Krt39Q6IFX4 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Krt39Q6IFX4 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC13.93□□□□□ -0.18
Krt39Q6IFX4 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Krt39Q6IFX4 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Krt39Q6IFX4 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Krt39Q6IFX4 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC13.93□□□□□ -0.18
Krt39Q6IFX4 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Krt39Q6IFX4 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Krt39Q6IFX4 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Krt39Q6IFX4 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Krt39Q6IFX4 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Krt39Q6IFX4 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Krt39Q6IFX4 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Krt39Q6IFX4 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Krt39Q6IFX4 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Krt39Q6IFX4 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Krt39Q6IFX4 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Krt39Q6IFX4 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC13.92□□□□□ -0.18
Krt39Q6IFX4 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Krt39Q6IFX4 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Krt39Q6IFX4 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Krt39Q6IFX4 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Krt39Q6IFX4 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Krt39Q6IFX4 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Krt39Q6IFX4 Map1b-203ENSMUST00000223725 2669 ntBASIC13.92□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 37.2 ms