Protein–RNA interactions for Protein: Q62018

Ctr9, RNA polymerase-associated protein CTR9 homolog, mousemouse

Known RBP Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctr9Q62018 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ctr9Q62018 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Ctr9Q62018 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ctr9Q62018 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ctr9Q62018 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Ctr9Q62018 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Ctr9Q62018 Gm14726-201ENSMUST00000120623 896 ntBASIC14.92□□□□□ -0.02
Ctr9Q62018 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC14.92□□□□□ -0.02
Ctr9Q62018 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ctr9Q62018 Gm5597-201ENSMUST00000182353 1193 ntBASIC14.92□□□□□ -0.02
Ctr9Q62018 Gm38241-201ENSMUST00000192641 898 ntBASIC14.92□□□□□ -0.02
Ctr9Q62018 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC14.92□□□□□ -0.02
Ctr9Q62018 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC14.92□□□□□ -0.02
Ctr9Q62018 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC14.92□□□□□ -0.02
Ctr9Q62018 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
Ctr9Q62018 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ctr9Q62018 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ctr9Q62018 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ctr9Q62018 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC14.92□□□□□ -0.02
Ctr9Q62018 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Ctr9Q62018 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ctr9Q62018 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC14.92□□□□□ -0.02
Ctr9Q62018 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ctr9Q62018 Paupar-201ENSMUST00000194826 3482 ntBASIC14.92□□□□□ -0.02
Ctr9Q62018 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ctr9Q62018 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC14.92□□□□□ -0.02
Ctr9Q62018 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC14.92□□□□□ -0.02
Ctr9Q62018 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Ctr9Q62018 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ctr9Q62018 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
Ctr9Q62018 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ctr9Q62018 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ctr9Q62018 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Ctr9Q62018 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ctr9Q62018 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC14.91□□□□□ -0.02
Ctr9Q62018 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
Ctr9Q62018 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Ctr9Q62018 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ctr9Q62018 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Ctr9Q62018 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ctr9Q62018 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Ctr9Q62018 Gm14381-201ENSMUST00000122105 414 ntBASIC14.91□□□□□ -0.02
Ctr9Q62018 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Ctr9Q62018 Gm27243-201ENSMUST00000183964 521 ntBASIC14.91□□□□□ -0.02
Ctr9Q62018 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ctr9Q62018 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Ctr9Q62018 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC14.91□□□□□ -0.02
Ctr9Q62018 AC166095.1-201ENSMUST00000223731 1241 ntBASIC14.91□□□□□ -0.02
Ctr9Q62018 AC154305.4-201ENSMUST00000224520 614 ntBASIC14.91□□□□□ -0.02
Ctr9Q62018 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Ctr9Q62018 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Ctr9Q62018 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ctr9Q62018 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC14.91□□□□□ -0.02
Ctr9Q62018 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ctr9Q62018 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Ctr9Q62018 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Ctr9Q62018 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Ctr9Q62018 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ctr9Q62018 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Ctr9Q62018 Gm45743-201ENSMUST00000212701 2795 ntBASIC14.9□□□□□ -0.02
Ctr9Q62018 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ctr9Q62018 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ctr9Q62018 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ctr9Q62018 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC14.9□□□□□ -0.02
Ctr9Q62018 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Ctr9Q62018 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Ctr9Q62018 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Ctr9Q62018 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ctr9Q62018 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Ctr9Q62018 Gm45643-201ENSMUST00000211364 1484 ntBASIC14.9□□□□□ -0.02
Ctr9Q62018 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ctr9Q62018 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ctr9Q62018 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Ctr9Q62018 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ctr9Q62018 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ctr9Q62018 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Ctr9Q62018 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC14.9□□□□□ -0.02
Ctr9Q62018 Gm17376-201ENSMUST00000166016 84 ntBASIC14.9□□□□□ -0.02
Ctr9Q62018 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC14.9□□□□□ -0.02
Ctr9Q62018 Gm26956-201ENSMUST00000182176 986 ntBASIC14.9□□□□□ -0.02
Ctr9Q62018 Ighv1-62-201ENSMUST00000193406 350 ntBASIC14.9□□□□□ -0.02
Ctr9Q62018 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC14.9□□□□□ -0.02
Ctr9Q62018 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ctr9Q62018 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ctr9Q62018 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ctr9Q62018 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ctr9Q62018 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ctr9Q62018 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ctr9Q62018 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Ctr9Q62018 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
Ctr9Q62018 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Ctr9Q62018 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ctr9Q62018 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ctr9Q62018 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ctr9Q62018 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ctr9Q62018 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Ctr9Q62018 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ctr9Q62018 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Ctr9Q62018 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Ctr9Q62018 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 67.8 ms