Protein–RNA interactions for Protein: Q61657

Hes3, Transcription factor HES-3, mousemouse

Predictions only

Length 175 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hes3Q61657 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Hes3Q61657 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Hes3Q61657 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Hes3Q61657 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Hes3Q61657 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Hes3Q61657 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC10.89□□□□□ -0.67
Hes3Q61657 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
Hes3Q61657 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Hes3Q61657 Gm2420-201ENSMUST00000119864 2149 ntBASIC10.89□□□□□ -0.67
Hes3Q61657 Gm11803-201ENSMUST00000119966 444 ntBASIC10.89□□□□□ -0.67
Hes3Q61657 Gm14704-201ENSMUST00000120300 874 ntBASIC10.89□□□□□ -0.67
Hes3Q61657 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC10.89□□□□□ -0.67
Hes3Q61657 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC10.89□□□□□ -0.67
Hes3Q61657 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Hes3Q61657 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Hes3Q61657 Gm9124-201ENSMUST00000191789 1092 ntBASIC10.89□□□□□ -0.67
Hes3Q61657 Gm9113-201ENSMUST00000192510 1018 ntBASIC10.89□□□□□ -0.67
Hes3Q61657 Gm9131-201ENSMUST00000193557 1089 ntBASIC10.89□□□□□ -0.67
Hes3Q61657 Gm9121-201ENSMUST00000193749 1071 ntBASIC10.89□□□□□ -0.67
Hes3Q61657 AC138604.1-201ENSMUST00000226969 739 ntBASIC10.89□□□□□ -0.67
Hes3Q61657 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Hes3Q61657 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
Hes3Q61657 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Hes3Q61657 Zbtb44-201ENSMUST00000115222 8861 ntTSL 5 BASIC10.89□□□□□ -0.67
Hes3Q61657 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Hes3Q61657 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Hes3Q61657 Pck2-205ENSMUST00000226352 2784 ntBASIC10.89□□□□□ -0.67
Hes3Q61657 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Hes3Q61657 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Hes3Q61657 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Hes3Q61657 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Hes3Q61657 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
Hes3Q61657 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Hes3Q61657 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC10.89□□□□□ -0.67
Hes3Q61657 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Hes3Q61657 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Hes3Q61657 Triobp-203ENSMUST00000109689 7187 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Hes3Q61657 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Hes3Q61657 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Hes3Q61657 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Hes3Q61657 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Hes3Q61657 Tsga10-202ENSMUST00000088072 3837 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Hes3Q61657 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Hes3Q61657 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Hes3Q61657 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Hes3Q61657 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
Hes3Q61657 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC10.89□□□□□ -0.67
Hes3Q61657 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC10.89□□□□□ -0.67
Hes3Q61657 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Hes3Q61657 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC10.88□□□□□ -0.67
Hes3Q61657 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Hes3Q61657 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Hes3Q61657 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Hes3Q61657 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Hes3Q61657 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Hes3Q61657 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
Hes3Q61657 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Hes3Q61657 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Hes3Q61657 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC10.88□□□□□ -0.67
Hes3Q61657 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
Hes3Q61657 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Hes3Q61657 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
Hes3Q61657 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC10.88□□□□□ -0.67
Hes3Q61657 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Hes3Q61657 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Hes3Q61657 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Hes3Q61657 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Hes3Q61657 Gm13813-201ENSMUST00000120998 787 ntBASIC10.88□□□□□ -0.67
Hes3Q61657 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Hes3Q61657 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Hes3Q61657 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Hes3Q61657 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Hes3Q61657 Gm8515-201ENSMUST00000194852 576 ntBASIC10.88□□□□□ -0.67
Hes3Q61657 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC10.88□□□□□ -0.67
Hes3Q61657 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC10.88□□□□□ -0.67
Hes3Q61657 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Hes3Q61657 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC10.88□□□□□ -0.67
Hes3Q61657 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC10.88□□□□□ -0.67
Hes3Q61657 CT030657.3-201ENSMUST00000222707 1200 ntBASIC10.88□□□□□ -0.67
Hes3Q61657 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
Hes3Q61657 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Hes3Q61657 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Hes3Q61657 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Hes3Q61657 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Hes3Q61657 Mir339-201ENSMUST00000083659 96 ntBASIC10.88□□□□□ -0.67
Hes3Q61657 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
Hes3Q61657 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Hes3Q61657 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Hes3Q61657 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Hes3Q61657 Gm38157-201ENSMUST00000194178 1698 ntBASIC10.88□□□□□ -0.67
Hes3Q61657 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Hes3Q61657 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Hes3Q61657 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Hes3Q61657 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC10.88□□□□□ -0.67
Hes3Q61657 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Hes3Q61657 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Hes3Q61657 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Hes3Q61657 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Hes3Q61657 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Hes3Q61657 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms