Protein–RNA interactions for Protein: Q61473

Sox17, Transcription factor SOX-17, mousemouse

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox17Q61473 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC11.83□□□□□ -0.52
Sox17Q61473 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Sox17Q61473 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Sox17Q61473 Gm9630-201ENSMUST00000178304 885 ntBASIC11.83□□□□□ -0.52
Sox17Q61473 Gm27390-201ENSMUST00000184516 176 ntBASIC11.83□□□□□ -0.52
Sox17Q61473 Gm7063-201ENSMUST00000186840 981 ntBASIC11.83□□□□□ -0.52
Sox17Q61473 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC11.83□□□□□ -0.52
Sox17Q61473 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC11.83□□□□□ -0.52
Sox17Q61473 Gm18636-201ENSMUST00000218846 1066 ntBASIC11.83□□□□□ -0.52
Sox17Q61473 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC11.83□□□□□ -0.52
Sox17Q61473 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC11.83□□□□□ -0.52
Sox17Q61473 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC11.83□□□□□ -0.52
Sox17Q61473 AC192088.1-201ENSMUST00000227561 301 ntBASIC11.83□□□□□ -0.52
Sox17Q61473 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Sox17Q61473 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Sox17Q61473 Adcy9-201ENSMUST00000005719 4457 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Sox17Q61473 Rbm6-207ENSMUST00000183032 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Sox17Q61473 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Sox17Q61473 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC11.83□□□□□ -0.52
Sox17Q61473 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Sox17Q61473 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC11.83□□□□□ -0.52
Sox17Q61473 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Sox17Q61473 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Sox17Q61473 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Sox17Q61473 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Sox17Q61473 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Sox17Q61473 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Sox17Q61473 3110062M04Rik-201ENSMUST00000055097 3681 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Sox17Q61473 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Sox17Q61473 Brd3-210ENSMUST00000164296 2791 ntAPPRIS P3 TSL 5 BASIC11.83□□□□□ -0.52
Sox17Q61473 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Sox17Q61473 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Sox17Q61473 Ccdc151-202ENSMUST00000115336 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Sox17Q61473 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Sox17Q61473 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Sox17Q61473 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC11.82□□□□□ -0.52
Sox17Q61473 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Sox17Q61473 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sox17Q61473 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sox17Q61473 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sox17Q61473 Cacng5-201ENSMUST00000039071 3705 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sox17Q61473 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sox17Q61473 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sox17Q61473 Mylip-202ENSMUST00000222178 1954 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Sox17Q61473 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Sox17Q61473 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Sox17Q61473 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Sox17Q61473 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC11.82□□□□□ -0.52
Sox17Q61473 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sox17Q61473 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Sox17Q61473 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC11.82□□□□□ -0.52
Sox17Q61473 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC11.82□□□□□ -0.52
Sox17Q61473 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Sox17Q61473 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sox17Q61473 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC11.82□□□□□ -0.52
Sox17Q61473 Tmem246-201ENSMUST00000042750 2989 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sox17Q61473 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sox17Q61473 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Sox17Q61473 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sox17Q61473 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Sox17Q61473 Coa5-201ENSMUST00000027286 3863 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sox17Q61473 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sox17Q61473 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sox17Q61473 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Sox17Q61473 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sox17Q61473 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sox17Q61473 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sox17Q61473 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Sox17Q61473 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC11.82□□□□□ -0.52
Sox17Q61473 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
Sox17Q61473 Fn3krp-201ENSMUST00000038096 2520 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sox17Q61473 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sox17Q61473 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Sox17Q61473 Fnbp1-210ENSMUST00000113564 3892 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Sox17Q61473 Tor1aip1-202ENSMUST00000097527 4234 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Sox17Q61473 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Sox17Q61473 Nol3-201ENSMUST00000014920 3176 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Sox17Q61473 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Sox17Q61473 AC160410.1-201ENSMUST00000219298 1972 ntBASIC11.81□□□□□ -0.52
Sox17Q61473 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Sox17Q61473 Nek4-201ENSMUST00000050171 2793 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Sox17Q61473 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Sox17Q61473 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Sox17Q61473 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Sox17Q61473 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Sox17Q61473 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Sox17Q61473 Ubap1-201ENSMUST00000072866 3456 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Sox17Q61473 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Sox17Q61473 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Sox17Q61473 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Sox17Q61473 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Sox17Q61473 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC11.81□□□□□ -0.52
Sox17Q61473 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC11.81□□□□□ -0.52
Sox17Q61473 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Sox17Q61473 Gm27702-201ENSMUST00000184512 56 ntBASIC11.81□□□□□ -0.52
Sox17Q61473 Gm38223-201ENSMUST00000194484 695 ntBASIC11.81□□□□□ -0.52
Sox17Q61473 Gm7730-201ENSMUST00000212486 454 ntBASIC11.81□□□□□ -0.52
Sox17Q61473 AC166051.1-201ENSMUST00000214313 210 ntBASIC11.81□□□□□ -0.52
Sox17Q61473 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC11.81□□□□□ -0.52
Sox17Q61473 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC11.81□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 58.2 ms