Protein–RNA interactions for Protein: Q61412

Vsx2, Visual system homeobox 2, mousemouse

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx2Q61412 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Vsx2Q61412 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC12.33□□□□□ -0.44
Vsx2Q61412 Gm17208-201ENSMUST00000168388 535 ntBASIC12.33□□□□□ -0.44
Vsx2Q61412 Gm27514-201ENSMUST00000183692 110 ntBASIC12.33□□□□□ -0.44
Vsx2Q61412 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC12.33□□□□□ -0.44
Vsx2Q61412 Gm43630-201ENSMUST00000201550 776 ntBASIC12.33□□□□□ -0.44
Vsx2Q61412 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Vsx2Q61412 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Vsx2Q61412 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Vsx2Q61412 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Vsx2Q61412 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC12.33□□□□□ -0.44
Vsx2Q61412 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Vsx2Q61412 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Vsx2Q61412 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Vsx2Q61412 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Vsx2Q61412 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Vsx2Q61412 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Vsx2Q61412 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Vsx2Q61412 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Vsx2Q61412 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Vsx2Q61412 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Vsx2Q61412 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Vsx2Q61412 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Vsx2Q61412 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Vsx2Q61412 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC12.32□□□□□ -0.44
Vsx2Q61412 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC12.32□□□□□ -0.44
Vsx2Q61412 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Vsx2Q61412 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Vsx2Q61412 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Vsx2Q61412 Gm44241-201ENSMUST00000203230 1662 ntBASIC12.32□□□□□ -0.44
Vsx2Q61412 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Vsx2Q61412 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Vsx2Q61412 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Vsx2Q61412 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Vsx2Q61412 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Vsx2Q61412 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Vsx2Q61412 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
Vsx2Q61412 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Vsx2Q61412 Gm23931-201ENSMUST00000103842 109 ntBASIC12.32□□□□□ -0.44
Vsx2Q61412 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Vsx2Q61412 Gm5187-201ENSMUST00000117317 991 ntBASIC12.32□□□□□ -0.44
Vsx2Q61412 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
Vsx2Q61412 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC12.32□□□□□ -0.44
Vsx2Q61412 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Vsx2Q61412 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Vsx2Q61412 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Vsx2Q61412 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC12.32□□□□□ -0.44
Vsx2Q61412 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC12.32□□□□□ -0.44
Vsx2Q61412 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Vsx2Q61412 Gm27572-201ENSMUST00000183702 255 ntBASIC12.32□□□□□ -0.44
Vsx2Q61412 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC12.32□□□□□ -0.44
Vsx2Q61412 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Vsx2Q61412 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Vsx2Q61412 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Vsx2Q61412 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Vsx2Q61412 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
Vsx2Q61412 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Vsx2Q61412 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Vsx2Q61412 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Vsx2Q61412 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Vsx2Q61412 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Vsx2Q61412 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Vsx2Q61412 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Vsx2Q61412 Gm15897-201ENSMUST00000117770 1486 ntBASIC12.32□□□□□ -0.44
Vsx2Q61412 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Vsx2Q61412 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Vsx2Q61412 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Vsx2Q61412 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC12.32□□□□□ -0.44
Vsx2Q61412 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Vsx2Q61412 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Vsx2Q61412 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Vsx2Q61412 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Vsx2Q61412 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Vsx2Q61412 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Vsx2Q61412 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Vsx2Q61412 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Vsx2Q61412 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Vsx2Q61412 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Vsx2Q61412 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Vsx2Q61412 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Vsx2Q61412 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Vsx2Q61412 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC12.31□□□□□ -0.44
Vsx2Q61412 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Vsx2Q61412 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Vsx2Q61412 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Vsx2Q61412 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Vsx2Q61412 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Vsx2Q61412 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Vsx2Q61412 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Vsx2Q61412 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Vsx2Q61412 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Vsx2Q61412 Gm13392-201ENSMUST00000117708 150 ntBASIC12.31□□□□□ -0.44
Vsx2Q61412 Gm12363-201ENSMUST00000122250 668 ntBASIC12.31□□□□□ -0.44
Vsx2Q61412 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC12.31□□□□□ -0.44
Vsx2Q61412 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Vsx2Q61412 Gm37042-201ENSMUST00000193816 581 ntBASIC12.31□□□□□ -0.44
Vsx2Q61412 Gm37008-201ENSMUST00000195712 319 ntBASIC12.31□□□□□ -0.44
Vsx2Q61412 Gm4768-201ENSMUST00000206199 686 ntBASIC12.31□□□□□ -0.44
Vsx2Q61412 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC12.31□□□□□ -0.44
Vsx2Q61412 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC12.31□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 111.9 ms