Protein–RNA interactions for Protein: Q61245

Col11a1, Collagen alpha-1(XI) chain, mousemouse

Predictions only

Length 1,804 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col11a1Q61245 Gm18711-201ENSMUST00000199341 750 ntBASIC13.85□□□□□ -0.19
Col11a1Q61245 Gm44711-201ENSMUST00000205414 1264 ntBASIC13.85□□□□□ -0.19
Col11a1Q61245 AC126799.1-201ENSMUST00000221976 246 ntBASIC13.85□□□□□ -0.19
Col11a1Q61245 Srp19-201ENSMUST00000072576 876 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Col11a1Q61245 Tmem39a-204ENSMUST00000163884 1645 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Col11a1Q61245 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Col11a1Q61245 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Col11a1Q61245 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Col11a1Q61245 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Col11a1Q61245 Gm18198-201ENSMUST00000204986 1551 ntBASIC13.84□□□□□ -0.19
Col11a1Q61245 Ube2q2-203ENSMUST00000122441 2081 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Col11a1Q61245 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Col11a1Q61245 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Col11a1Q61245 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Col11a1Q61245 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Col11a1Q61245 Tmem176b-202ENSMUST00000164733 1648 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Col11a1Q61245 Gm42840-201ENSMUST00000200303 2251 ntBASIC13.84□□□□□ -0.19
Col11a1Q61245 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Col11a1Q61245 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Col11a1Q61245 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Col11a1Q61245 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Col11a1Q61245 Ralyl-202ENSMUST00000108373 267 ntTSL 5 BASIC13.84□□□□□ -0.19
Col11a1Q61245 1810021B22Rik-201ENSMUST00000150364 652 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Col11a1Q61245 Csmd2os-202ENSMUST00000179945 643 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Col11a1Q61245 Gm8531-201ENSMUST00000188319 893 ntBASIC13.84□□□□□ -0.19
Col11a1Q61245 Ap3s1-202ENSMUST00000224622 978 ntBASIC13.84□□□□□ -0.19
Col11a1Q61245 Ccdc153-201ENSMUST00000092426 1087 ntAPPRIS P2 TSL 2 BASIC13.84□□□□□ -0.19
Col11a1Q61245 n-R5s211-201ENSMUST00000093689 119 ntBASIC13.84□□□□□ -0.19
Col11a1Q61245 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Col11a1Q61245 Gm37795-201ENSMUST00000194216 2459 ntBASIC13.84□□□□□ -0.19
Col11a1Q61245 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Col11a1Q61245 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Col11a1Q61245 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Col11a1Q61245 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Col11a1Q61245 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Col11a1Q61245 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC13.84□□□□□ -0.19
Col11a1Q61245 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Col11a1Q61245 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.19
Col11a1Q61245 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Col11a1Q61245 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Col11a1Q61245 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Col11a1Q61245 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Col11a1Q61245 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
Col11a1Q61245 2810403D21Rik-208ENSMUST00000153212 1005 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Col11a1Q61245 Rps19-ps9-201ENSMUST00000161787 414 ntBASIC13.83□□□□□ -0.2
Col11a1Q61245 Gm29418-201ENSMUST00000186162 647 ntTSL 5 BASIC13.83□□□□□ -0.2
Col11a1Q61245 Gm28166-201ENSMUST00000187637 620 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Col11a1Q61245 Gm18463-201ENSMUST00000207258 474 ntBASIC13.83□□□□□ -0.2
Col11a1Q61245 Gm18460-201ENSMUST00000208088 464 ntBASIC13.83□□□□□ -0.2
Col11a1Q61245 Tex29-205ENSMUST00000209692 884 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Col11a1Q61245 Gm35625-201ENSMUST00000210416 316 ntTSL 3 BASIC13.83□□□□□ -0.2
Col11a1Q61245 Stt3a-209ENSMUST00000217599 285 ntTSL 5 BASIC13.83□□□□□ -0.2
Col11a1Q61245 AC093022.5-201ENSMUST00000226841 1079 ntBASIC13.83□□□□□ -0.2
Col11a1Q61245 Ifitm2-201ENSMUST00000081649 655 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Col11a1Q61245 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Col11a1Q61245 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Col11a1Q61245 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Col11a1Q61245 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Col11a1Q61245 Gm37691-201ENSMUST00000192147 2573 ntBASIC13.83□□□□□ -0.2
Col11a1Q61245 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Col11a1Q61245 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Col11a1Q61245 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Col11a1Q61245 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Col11a1Q61245 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Col11a1Q61245 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Col11a1Q61245 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Col11a1Q61245 Gm44851-201ENSMUST00000205735 2309 ntBASIC13.83□□□□□ -0.2
Col11a1Q61245 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Col11a1Q61245 Gtf2h5-202ENSMUST00000100955 879 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Col11a1Q61245 Gm13267-201ENSMUST00000142787 698 ntTSL 3 BASIC13.83□□□□□ -0.2
Col11a1Q61245 9330179D12Rik-201ENSMUST00000180569 1105 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Col11a1Q61245 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC13.83□□□□□ -0.2
Col11a1Q61245 Fxyd4-203ENSMUST00000203082 815 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Col11a1Q61245 Ssr4-201ENSMUST00000002090 765 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Col11a1Q61245 Rab7-201ENSMUST00000095048 1275 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Col11a1Q61245 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Col11a1Q61245 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Col11a1Q61245 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Col11a1Q61245 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Col11a1Q61245 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Col11a1Q61245 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC13.82□□□□□ -0.2
Col11a1Q61245 AC122018.1-201ENSMUST00000217769 1686 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Col11a1Q61245 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Col11a1Q61245 Enpp7-202ENSMUST00000106273 1408 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Col11a1Q61245 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Col11a1Q61245 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Col11a1Q61245 Crygc-202ENSMUST00000114064 612 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Col11a1Q61245 Smim11-202ENSMUST00000118064 782 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
Col11a1Q61245 Churc1-203ENSMUST00000126408 462 ntTSL 2 BASIC13.82□□□□□ -0.2
Col11a1Q61245 Smyd1-205ENSMUST00000173297 947 ntTSL 5 BASIC13.82□□□□□ -0.2
Col11a1Q61245 E030018B13Rik-201ENSMUST00000177638 1015 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Col11a1Q61245 Iqcf3-202ENSMUST00000186668 633 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Col11a1Q61245 Rps10-ps1-201ENSMUST00000074353 495 ntBASIC13.82□□□□□ -0.2
Col11a1Q61245 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC13.82□□□□□ -0.2
Col11a1Q61245 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC13.82□□□□□ -0.2
Col11a1Q61245 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Col11a1Q61245 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Col11a1Q61245 Brd4-202ENSMUST00000114475 2731 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Col11a1Q61245 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Col11a1Q61245 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 40.9 ms