Protein–RNA interactions for Protein: Q60857

Slc6a4, Sodium-dependent serotonin transporter, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a4Q60857 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Slc6a4Q60857 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Slc6a4Q60857 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC12.93□□□□□ -0.34
Slc6a4Q60857 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Slc6a4Q60857 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Slc6a4Q60857 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Slc6a4Q60857 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Slc6a4Q60857 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Slc6a4Q60857 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Slc6a4Q60857 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Slc6a4Q60857 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Slc6a4Q60857 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Slc6a4Q60857 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Slc6a4Q60857 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Slc6a4Q60857 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Slc6a4Q60857 Gm37644-201ENSMUST00000192190 2270 ntBASIC12.92□□□□□ -0.34
Slc6a4Q60857 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC12.92□□□□□ -0.34
Slc6a4Q60857 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Slc6a4Q60857 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Slc6a4Q60857 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Slc6a4Q60857 Gm6210-201ENSMUST00000204734 1942 ntBASIC12.92□□□□□ -0.34
Slc6a4Q60857 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Slc6a4Q60857 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Slc6a4Q60857 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Slc6a4Q60857 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Slc6a4Q60857 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Slc6a4Q60857 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Slc6a4Q60857 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC12.92□□□□□ -0.34
Slc6a4Q60857 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Slc6a4Q60857 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC12.92□□□□□ -0.34
Slc6a4Q60857 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Slc6a4Q60857 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Slc6a4Q60857 Gm4819-201ENSMUST00000182170 1009 ntBASIC12.92□□□□□ -0.34
Slc6a4Q60857 Gm3096-201ENSMUST00000185770 364 ntBASIC12.92□□□□□ -0.34
Slc6a4Q60857 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Slc6a4Q60857 AA914427-201ENSMUST00000193194 1166 ntBASIC12.92□□□□□ -0.34
Slc6a4Q60857 Gm38317-201ENSMUST00000195564 343 ntBASIC12.92□□□□□ -0.34
Slc6a4Q60857 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC12.92□□□□□ -0.34
Slc6a4Q60857 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Slc6a4Q60857 Gm45003-201ENSMUST00000205875 2158 ntBASIC12.92□□□□□ -0.34
Slc6a4Q60857 Gm44967-201ENSMUST00000207047 631 ntBASIC12.92□□□□□ -0.34
Slc6a4Q60857 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Slc6a4Q60857 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC12.92□□□□□ -0.34
Slc6a4Q60857 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Slc6a4Q60857 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Slc6a4Q60857 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Slc6a4Q60857 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Slc6a4Q60857 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Slc6a4Q60857 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Slc6a4Q60857 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Slc6a4Q60857 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Slc6a4Q60857 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Slc6a4Q60857 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC12.92□□□□□ -0.34
Slc6a4Q60857 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Slc6a4Q60857 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Slc6a4Q60857 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC12.92□□□□□ -0.34
Slc6a4Q60857 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Slc6a4Q60857 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Slc6a4Q60857 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Slc6a4Q60857 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Slc6a4Q60857 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Slc6a4Q60857 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Slc6a4Q60857 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Slc6a4Q60857 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Slc6a4Q60857 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Slc6a4Q60857 Gm28323-201ENSMUST00000186817 2499 ntBASIC12.91□□□□□ -0.34
Slc6a4Q60857 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Slc6a4Q60857 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Slc6a4Q60857 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Slc6a4Q60857 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Slc6a4Q60857 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC12.91□□□□□ -0.34
Slc6a4Q60857 Gm10782-202ENSMUST00000223775 1480 ntBASIC12.91□□□□□ -0.34
Slc6a4Q60857 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Slc6a4Q60857 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Slc6a4Q60857 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Slc6a4Q60857 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Slc6a4Q60857 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Slc6a4Q60857 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Slc6a4Q60857 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Slc6a4Q60857 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Slc6a4Q60857 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Slc6a4Q60857 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Slc6a4Q60857 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC12.91□□□□□ -0.34
Slc6a4Q60857 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Slc6a4Q60857 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Slc6a4Q60857 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Slc6a4Q60857 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC12.91□□□□□ -0.34
Slc6a4Q60857 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Slc6a4Q60857 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Slc6a4Q60857 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Slc6a4Q60857 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Slc6a4Q60857 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Slc6a4Q60857 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Slc6a4Q60857 Gm27046-201ENSMUST00000182160 463 ntBASIC12.91□□□□□ -0.34
Slc6a4Q60857 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Slc6a4Q60857 Gm9176-201ENSMUST00000219955 1120 ntBASIC12.91□□□□□ -0.34
Slc6a4Q60857 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC12.91□□□□□ -0.34
Slc6a4Q60857 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Slc6a4Q60857 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Slc6a4Q60857 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 54.5 ms