Protein–RNA interactions for Protein: Q5SNZ0

Ccdc88a, Girdin, mousemouse

Predictions only

Length 1,873 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88aQ5SNZ0 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Ccdc88aQ5SNZ0 Gm44942-201ENSMUST00000096093 2072 ntBASIC14.4□□□□□ -0.1
Ccdc88aQ5SNZ0 Lyzl6-202ENSMUST00000107014 802 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ccdc88aQ5SNZ0 Sec11a-204ENSMUST00000120285 875 ntTSL 3 BASIC14.4□□□□□ -0.1
Ccdc88aQ5SNZ0 Gm8494-201ENSMUST00000178171 1233 ntBASIC14.4□□□□□ -0.1
Ccdc88aQ5SNZ0 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Ccdc88aQ5SNZ0 Gm37666-201ENSMUST00000194110 866 ntBASIC14.4□□□□□ -0.1
Ccdc88aQ5SNZ0 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC14.4□□□□□ -0.1
Ccdc88aQ5SNZ0 Nop10-201ENSMUST00000028553 1109 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ccdc88aQ5SNZ0 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ccdc88aQ5SNZ0 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Ccdc88aQ5SNZ0 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ccdc88aQ5SNZ0 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
Ccdc88aQ5SNZ0 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Ccdc88aQ5SNZ0 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ccdc88aQ5SNZ0 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Ccdc88aQ5SNZ0 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ccdc88aQ5SNZ0 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Ccdc88aQ5SNZ0 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Ccdc88aQ5SNZ0 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Ccdc88aQ5SNZ0 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ccdc88aQ5SNZ0 Gm11340-201ENSMUST00000119226 412 ntBASIC14.4□□□□□ -0.1
Ccdc88aQ5SNZ0 Gm7666-201ENSMUST00000146631 819 ntBASIC14.4□□□□□ -0.1
Ccdc88aQ5SNZ0 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC14.4□□□□□ -0.1
Ccdc88aQ5SNZ0 Gm23119-201ENSMUST00000158610 140 ntBASIC14.4□□□□□ -0.1
Ccdc88aQ5SNZ0 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ccdc88aQ5SNZ0 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC14.4□□□□□ -0.1
Ccdc88aQ5SNZ0 Gm34045-201ENSMUST00000217700 988 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Ccdc88aQ5SNZ0 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ccdc88aQ5SNZ0 Sat1-201ENSMUST00000026318 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ccdc88aQ5SNZ0 Cmtm2a-201ENSMUST00000034344 1081 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ccdc88aQ5SNZ0 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Ccdc88aQ5SNZ0 Gm45342-201ENSMUST00000210903 1363 ntBASIC14.4□□□□□ -0.1
Ccdc88aQ5SNZ0 Gm44999-201ENSMUST00000207456 1493 ntBASIC14.4□□□□□ -0.11
Ccdc88aQ5SNZ0 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.11
Ccdc88aQ5SNZ0 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.11
Ccdc88aQ5SNZ0 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ccdc88aQ5SNZ0 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ccdc88aQ5SNZ0 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
Ccdc88aQ5SNZ0 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC14.39□□□□□ -0.11
Ccdc88aQ5SNZ0 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ccdc88aQ5SNZ0 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ccdc88aQ5SNZ0 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Ccdc88aQ5SNZ0 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC14.39□□□□□ -0.11
Ccdc88aQ5SNZ0 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Ccdc88aQ5SNZ0 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ccdc88aQ5SNZ0 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ccdc88aQ5SNZ0 AC123834.1-201ENSMUST00000225346 2043 ntBASIC14.39□□□□□ -0.11
Ccdc88aQ5SNZ0 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ccdc88aQ5SNZ0 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Ccdc88aQ5SNZ0 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Ccdc88aQ5SNZ0 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ccdc88aQ5SNZ0 AC122197.2-201ENSMUST00000219196 1635 ntBASIC14.39□□□□□ -0.11
Ccdc88aQ5SNZ0 Gm13047-201ENSMUST00000117116 815 ntBASIC14.39□□□□□ -0.11
Ccdc88aQ5SNZ0 Gm12058-201ENSMUST00000118614 437 ntBASIC14.39□□□□□ -0.11
Ccdc88aQ5SNZ0 Rmrp-201ENSMUST00000157463 271 ntBASIC14.39□□□□□ -0.11
Ccdc88aQ5SNZ0 Creb1-209ENSMUST00000190348 1260 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Ccdc88aQ5SNZ0 Ccdc12-201ENSMUST00000019803 834 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ccdc88aQ5SNZ0 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC14.39□□□□□ -0.11
Ccdc88aQ5SNZ0 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC14.39□□□□□ -0.11
Ccdc88aQ5SNZ0 AL732506.1-201ENSMUST00000226420 281 ntBASIC14.39□□□□□ -0.11
Ccdc88aQ5SNZ0 Rln1-201ENSMUST00000044143 745 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ccdc88aQ5SNZ0 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ccdc88aQ5SNZ0 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ccdc88aQ5SNZ0 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ccdc88aQ5SNZ0 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Ccdc88aQ5SNZ0 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ccdc88aQ5SNZ0 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ccdc88aQ5SNZ0 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Ccdc88aQ5SNZ0 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ccdc88aQ5SNZ0 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Ccdc88aQ5SNZ0 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
Ccdc88aQ5SNZ0 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Ccdc88aQ5SNZ0 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ccdc88aQ5SNZ0 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ccdc88aQ5SNZ0 Gm2673-201ENSMUST00000120958 1608 ntBASIC14.38□□□□□ -0.11
Ccdc88aQ5SNZ0 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ccdc88aQ5SNZ0 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ccdc88aQ5SNZ0 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Ccdc88aQ5SNZ0 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ccdc88aQ5SNZ0 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ccdc88aQ5SNZ0 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ccdc88aQ5SNZ0 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Ccdc88aQ5SNZ0 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ccdc88aQ5SNZ0 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC14.38□□□□□ -0.11
Ccdc88aQ5SNZ0 Ighg2c-201ENSMUST00000103416 1214 ntAPPRIS P5 BASIC14.38□□□□□ -0.11
Ccdc88aQ5SNZ0 Gm12798-201ENSMUST00000124786 666 ntTSL 5 BASIC14.38□□□□□ -0.11
Ccdc88aQ5SNZ0 Gm11211-201ENSMUST00000143618 359 ntTSL 3 BASIC14.38□□□□□ -0.11
Ccdc88aQ5SNZ0 Smim5-203ENSMUST00000152171 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ccdc88aQ5SNZ0 Coa3-202ENSMUST00000168089 291 ntTSL 3 BASIC14.38□□□□□ -0.11
Ccdc88aQ5SNZ0 3110080O07Rik-201ENSMUST00000193469 1021 ntBASIC14.38□□□□□ -0.11
Ccdc88aQ5SNZ0 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ccdc88aQ5SNZ0 Lcn6-201ENSMUST00000059693 1254 ntTSL 5 BASIC14.38□□□□□ -0.11
Ccdc88aQ5SNZ0 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Ccdc88aQ5SNZ0 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Ccdc88aQ5SNZ0 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ccdc88aQ5SNZ0 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC14.38□□□□□ -0.11
Ccdc88aQ5SNZ0 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ccdc88aQ5SNZ0 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ccdc88aQ5SNZ0 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 40.7 ms