Protein–RNA interactions for Protein: Q5R1F6

Trav5d-4, T cell receptor alpha variable 5D-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5d-4Q5R1F6 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trav5d-4Q5R1F6 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trav5d-4Q5R1F6 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trav5d-4Q5R1F6 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trav5d-4Q5R1F6 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Trav5d-4Q5R1F6 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trav5d-4Q5R1F6 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trav5d-4Q5R1F6 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trav5d-4Q5R1F6 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Trav5d-4Q5R1F6 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC10.86□□□□□ -0.67
Trav5d-4Q5R1F6 Gm44758-201ENSMUST00000206096 2068 ntBASIC10.86□□□□□ -0.67
Trav5d-4Q5R1F6 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trav5d-4Q5R1F6 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trav5d-4Q5R1F6 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trav5d-4Q5R1F6 Gm44775-201ENSMUST00000207266 1456 ntBASIC10.86□□□□□ -0.67
Trav5d-4Q5R1F6 Cog3-203ENSMUST00000227473 4197 ntBASIC10.86□□□□□ -0.67
Trav5d-4Q5R1F6 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Trav5d-4Q5R1F6 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trav5d-4Q5R1F6 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trav5d-4Q5R1F6 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trav5d-4Q5R1F6 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trav5d-4Q5R1F6 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC10.86□□□□□ -0.67
Trav5d-4Q5R1F6 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC10.86□□□□□ -0.67
Trav5d-4Q5R1F6 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Trav5d-4Q5R1F6 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav5d-4Q5R1F6 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav5d-4Q5R1F6 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
Trav5d-4Q5R1F6 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC10.85□□□□□ -0.67
Trav5d-4Q5R1F6 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav5d-4Q5R1F6 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav5d-4Q5R1F6 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav5d-4Q5R1F6 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav5d-4Q5R1F6 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav5d-4Q5R1F6 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav5d-4Q5R1F6 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav5d-4Q5R1F6 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Trav5d-4Q5R1F6 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav5d-4Q5R1F6 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav5d-4Q5R1F6 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC10.85□□□□□ -0.67
Trav5d-4Q5R1F6 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Trav5d-4Q5R1F6 Gm6992-201ENSMUST00000217973 1607 ntBASIC10.85□□□□□ -0.67
Trav5d-4Q5R1F6 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav5d-4Q5R1F6 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav5d-4Q5R1F6 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav5d-4Q5R1F6 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC10.85□□□□□ -0.67
Trav5d-4Q5R1F6 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Trav5d-4Q5R1F6 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC10.85□□□□□ -0.67
Trav5d-4Q5R1F6 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC10.85□□□□□ -0.67
Trav5d-4Q5R1F6 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Trav5d-4Q5R1F6 Gm7029-201ENSMUST00000173226 450 ntBASIC10.85□□□□□ -0.67
Trav5d-4Q5R1F6 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC10.85□□□□□ -0.67
Trav5d-4Q5R1F6 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Trav5d-4Q5R1F6 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC10.85□□□□□ -0.67
Trav5d-4Q5R1F6 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC10.85□□□□□ -0.67
Trav5d-4Q5R1F6 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Trav5d-4Q5R1F6 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC10.85□□□□□ -0.67
Trav5d-4Q5R1F6 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav5d-4Q5R1F6 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav5d-4Q5R1F6 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Trav5d-4Q5R1F6 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Trav5d-4Q5R1F6 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav5d-4Q5R1F6 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav5d-4Q5R1F6 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav5d-4Q5R1F6 Gm44414-201ENSMUST00000203660 2109 ntBASIC10.85□□□□□ -0.67
Trav5d-4Q5R1F6 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav5d-4Q5R1F6 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC10.85□□□□□ -0.67
Trav5d-4Q5R1F6 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC10.85□□□□□ -0.67
Trav5d-4Q5R1F6 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC10.85□□□□□ -0.67
Trav5d-4Q5R1F6 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav5d-4Q5R1F6 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trav5d-4Q5R1F6 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Trav5d-4Q5R1F6 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav5d-4Q5R1F6 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav5d-4Q5R1F6 Gm20554-201ENSMUST00000177421 2352 ntBASIC10.84□□□□□ -0.67
Trav5d-4Q5R1F6 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav5d-4Q5R1F6 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav5d-4Q5R1F6 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Trav5d-4Q5R1F6 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav5d-4Q5R1F6 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Trav5d-4Q5R1F6 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Trav5d-4Q5R1F6 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Trav5d-4Q5R1F6 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav5d-4Q5R1F6 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav5d-4Q5R1F6 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC10.84□□□□□ -0.67
Trav5d-4Q5R1F6 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav5d-4Q5R1F6 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC10.84□□□□□ -0.67
Trav5d-4Q5R1F6 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav5d-4Q5R1F6 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Trav5d-4Q5R1F6 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Trav5d-4Q5R1F6 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Trav5d-4Q5R1F6 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC10.84□□□□□ -0.67
Trav5d-4Q5R1F6 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Trav5d-4Q5R1F6 Gm44772-201ENSMUST00000207623 1191 ntBASIC10.84□□□□□ -0.67
Trav5d-4Q5R1F6 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC10.84□□□□□ -0.67
Trav5d-4Q5R1F6 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Trav5d-4Q5R1F6 AC140375.2-201ENSMUST00000225283 584 ntBASIC10.84□□□□□ -0.67
Trav5d-4Q5R1F6 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trav5d-4Q5R1F6 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Trav5d-4Q5R1F6 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Trav5d-4Q5R1F6 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 51.3 ms