Protein–RNA interactions for Protein: Q5R1C3

Trav3-3, T cell receptor alpha variable 3-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-3Q5R1C3 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC9.48□□□□□ -0.89
Trav3-3Q5R1C3 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC9.48□□□□□ -0.89
Trav3-3Q5R1C3 Gm18889-201ENSMUST00000174284 929 ntBASIC9.48□□□□□ -0.89
Trav3-3Q5R1C3 Gm8000-201ENSMUST00000188378 592 ntBASIC9.48□□□□□ -0.89
Trav3-3Q5R1C3 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC9.48□□□□□ -0.89
Trav3-3Q5R1C3 Ighv1-25-201ENSMUST00000195638 345 ntBASIC9.48□□□□□ -0.89
Trav3-3Q5R1C3 Gm6443-201ENSMUST00000203599 874 ntBASIC9.48□□□□□ -0.89
Trav3-3Q5R1C3 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Trav3-3Q5R1C3 Gm15500-202ENSMUST00000071641 1019 ntBASIC9.48□□□□□ -0.89
Trav3-3Q5R1C3 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Trav3-3Q5R1C3 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC9.48□□□□□ -0.89
Trav3-3Q5R1C3 Mir125a-201ENSMUST00000083545 68 ntBASIC9.48□□□□□ -0.89
Trav3-3Q5R1C3 Gm10175-201ENSMUST00000086013 645 ntBASIC9.48□□□□□ -0.89
Trav3-3Q5R1C3 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC9.48□□□□□ -0.89
Trav3-3Q5R1C3 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC9.48□□□□□ -0.89
Trav3-3Q5R1C3 Neu2-206ENSMUST00000166259 1596 ntAPPRIS P3 TSL 1 (best) BASIC9.48□□□□□ -0.89
Trav3-3Q5R1C3 Gm37422-201ENSMUST00000193794 4718 ntBASIC9.48□□□□□ -0.89
Trav3-3Q5R1C3 AC114543.1-201ENSMUST00000226451 1558 ntBASIC9.48□□□□□ -0.89
Trav3-3Q5R1C3 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Trav3-3Q5R1C3 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC9.48□□□□□ -0.89
Trav3-3Q5R1C3 Nfic-203ENSMUST00000105321 6237 ntAPPRIS ALT2 TSL 1 (best) BASIC9.48□□□□□ -0.89
Trav3-3Q5R1C3 Grin1-208ENSMUST00000114318 3920 ntTSL 5 BASIC9.48□□□□□ -0.89
Trav3-3Q5R1C3 Gm43375-201ENSMUST00000196705 2480 ntBASIC9.48□□□□□ -0.89
Trav3-3Q5R1C3 Brd3-210ENSMUST00000164296 2791 ntAPPRIS P3 TSL 5 BASIC9.48□□□□□ -0.89
Trav3-3Q5R1C3 Chrng-201ENSMUST00000027470 2780 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Trav3-3Q5R1C3 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC9.48□□□□□ -0.89
Trav3-3Q5R1C3 4932443L11Rik-202ENSMUST00000177130 2827 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Trav3-3Q5R1C3 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Trav3-3Q5R1C3 Piwil1-201ENSMUST00000086056 4016 ntAPPRIS P2 TSL 1 (best) BASIC9.48□□□□□ -0.89
Trav3-3Q5R1C3 Lamb1-205ENSMUST00000169088 5557 ntAPPRIS P1 TSL 5 BASIC9.48□□□□□ -0.89
Trav3-3Q5R1C3 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC9.48□□□□□ -0.89
Trav3-3Q5R1C3 Gm19165-201ENSMUST00000204453 1982 ntBASIC9.48□□□□□ -0.89
Trav3-3Q5R1C3 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Trav3-3Q5R1C3 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Trav3-3Q5R1C3 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Trav3-3Q5R1C3 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC9.48□□□□□ -0.89
Trav3-3Q5R1C3 Slc25a48-201ENSMUST00000021971 3374 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Trav3-3Q5R1C3 Dclk2-202ENSMUST00000191752 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Trav3-3Q5R1C3 Olfr370-203ENSMUST00000214156 2475 ntAPPRIS P1 TSL 5 BASIC9.47□□□□□ -0.89
Trav3-3Q5R1C3 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Trav3-3Q5R1C3 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Trav3-3Q5R1C3 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Trav3-3Q5R1C3 Mcf2l-217ENSMUST00000145067 5313 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Trav3-3Q5R1C3 Phf24-202ENSMUST00000107975 6494 ntAPPRIS P1 TSL 2 BASIC9.47□□□□□ -0.89
Trav3-3Q5R1C3 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC9.47□□□□□ -0.89
Trav3-3Q5R1C3 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Trav3-3Q5R1C3 Gaa-201ENSMUST00000026666 3363 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Trav3-3Q5R1C3 Sox8-201ENSMUST00000025003 3000 ntAPPRIS P2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Trav3-3Q5R1C3 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC9.47□□□□□ -0.89
Trav3-3Q5R1C3 Pdzk1-203ENSMUST00000107070 2711 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Trav3-3Q5R1C3 Gm11779-201ENSMUST00000118541 368 ntBASIC9.47□□□□□ -0.89
Trav3-3Q5R1C3 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC9.47□□□□□ -0.89
Trav3-3Q5R1C3 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC9.47□□□□□ -0.89
Trav3-3Q5R1C3 Gm9719-201ENSMUST00000162765 543 ntBASIC9.47□□□□□ -0.89
Trav3-3Q5R1C3 Gm27631-201ENSMUST00000184163 466 ntBASIC9.47□□□□□ -0.89
Trav3-3Q5R1C3 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC9.47□□□□□ -0.89
Trav3-3Q5R1C3 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC9.47□□□□□ -0.89
Trav3-3Q5R1C3 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC9.47□□□□□ -0.89
Trav3-3Q5R1C3 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC9.47□□□□□ -0.89
Trav3-3Q5R1C3 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC9.47□□□□□ -0.89
Trav3-3Q5R1C3 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC9.47□□□□□ -0.89
Trav3-3Q5R1C3 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Trav3-3Q5R1C3 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Trav3-3Q5R1C3 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Trav3-3Q5R1C3 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Trav3-3Q5R1C3 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Trav3-3Q5R1C3 Nol6-201ENSMUST00000030138 4599 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Trav3-3Q5R1C3 Nfx1-203ENSMUST00000098143 4594 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Trav3-3Q5R1C3 Khnyn-201ENSMUST00000022831 3898 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Trav3-3Q5R1C3 Gm35507-201ENSMUST00000197932 2761 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Trav3-3Q5R1C3 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Trav3-3Q5R1C3 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Trav3-3Q5R1C3 Gm15567-201ENSMUST00000148699 2130 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Trav3-3Q5R1C3 Pbrm1-207ENSMUST00000112095 7907 ntTSL 5 BASIC9.47□□□□□ -0.89
Trav3-3Q5R1C3 Aoc2-201ENSMUST00000041095 2543 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Trav3-3Q5R1C3 Nos3-201ENSMUST00000030834 4132 ntAPPRIS P2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Trav3-3Q5R1C3 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Trav3-3Q5R1C3 Nefl-201ENSMUST00000022639 3380 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Trav3-3Q5R1C3 Pou2f3-201ENSMUST00000034513 2610 ntAPPRIS ALT2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Trav3-3Q5R1C3 Ccl22-201ENSMUST00000034231 2216 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Trav3-3Q5R1C3 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Trav3-3Q5R1C3 Topors-201ENSMUST00000042575 3856 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Trav3-3Q5R1C3 Mknk2-201ENSMUST00000003433 3065 ntAPPRIS ALT2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Trav3-3Q5R1C3 Zscan10-201ENSMUST00000095595 2698 ntAPPRIS P3 TSL 1 (best) BASIC9.47□□□□□ -0.89
Trav3-3Q5R1C3 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Trav3-3Q5R1C3 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Trav3-3Q5R1C3 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Trav3-3Q5R1C3 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC9.46□□□□□ -0.89
Trav3-3Q5R1C3 Umad1-201ENSMUST00000159168 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.89
Trav3-3Q5R1C3 Cttn-201ENSMUST00000033407 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.89
Trav3-3Q5R1C3 Adgrl3-214ENSMUST00000120445 5230 ntTSL 5 BASIC9.46□□□□□ -0.89
Trav3-3Q5R1C3 Tmem135-202ENSMUST00000117852 2986 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
Trav3-3Q5R1C3 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC9.46□□□□□ -0.89
Trav3-3Q5R1C3 Gm15587-201ENSMUST00000146326 3493 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
Trav3-3Q5R1C3 Ncor2-202ENSMUST00000086083 8575 ntAPPRIS P2 TSL 5 BASIC9.46□□□□□ -0.89
Trav3-3Q5R1C3 Trp53inp2-201ENSMUST00000043237 3979 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Trav3-3Q5R1C3 Kirrel3-209ENSMUST00000190549 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.89
Trav3-3Q5R1C3 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC9.46□□□□□ -0.89
Trav3-3Q5R1C3 Hdac6-202ENSMUST00000115642 4069 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Trav3-3Q5R1C3 Socs6-201ENSMUST00000070116 6036 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Retrieved 100 of 76,532 protein–RNA pairs in 40.9 ms