Protein–RNA interactions for Protein: Q5NCC3

Trim41, E3 ubiquitin-protein ligase TRIM41, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim41Q5NCC3 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC21.94■■□□□ 1.1
Trim41Q5NCC3 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Trim41Q5NCC3 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC21.94■■□□□ 1.1
Trim41Q5NCC3 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC21.94■■□□□ 1.1
Trim41Q5NCC3 Gm6630-201ENSMUST00000119199 454 ntBASIC21.94■■□□□ 1.1
Trim41Q5NCC3 Gm12266-201ENSMUST00000120311 962 ntBASIC21.94■■□□□ 1.1
Trim41Q5NCC3 Bcas3os2-201ENSMUST00000134305 661 ntTSL 5 BASIC21.94■■□□□ 1.1
Trim41Q5NCC3 E130307A14Rik-203ENSMUST00000136862 608 ntTSL 3 BASIC21.94■■□□□ 1.1
Trim41Q5NCC3 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Trim41Q5NCC3 Gm38304-201ENSMUST00000161826 600 ntTSL 3 BASIC21.94■■□□□ 1.1
Trim41Q5NCC3 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Trim41Q5NCC3 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC21.94■■□□□ 1.1
Trim41Q5NCC3 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Trim41Q5NCC3 Gm45224-201ENSMUST00000208203 414 ntBASIC21.94■■□□□ 1.1
Trim41Q5NCC3 Nps-202ENSMUST00000210697 1082 ntTSL 5 BASIC21.94■■□□□ 1.1
Trim41Q5NCC3 Gm7207-201ENSMUST00000211575 1067 ntBASIC21.94■■□□□ 1.1
Trim41Q5NCC3 AC125209.1-201ENSMUST00000225812 766 ntBASIC21.94■■□□□ 1.1
Trim41Q5NCC3 Pstpip2-201ENSMUST00000114741 1395 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Trim41Q5NCC3 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC21.94■■□□□ 1.1
Trim41Q5NCC3 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Trim41Q5NCC3 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC21.94■■□□□ 1.1
Trim41Q5NCC3 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC21.94■■□□□ 1.1
Trim41Q5NCC3 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Trim41Q5NCC3 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC21.93■■□□□ 1.1
Trim41Q5NCC3 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Trim41Q5NCC3 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Trim41Q5NCC3 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC21.93■■□□□ 1.1
Trim41Q5NCC3 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC21.93■■□□□ 1.1
Trim41Q5NCC3 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Trim41Q5NCC3 Gm44401-201ENSMUST00000204462 2375 ntBASIC21.93■■□□□ 1.1
Trim41Q5NCC3 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Trim41Q5NCC3 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC21.93■■□□□ 1.1
Trim41Q5NCC3 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
Trim41Q5NCC3 AC166344.1-202ENSMUST00000224139 234 ntBASIC21.93■■□□□ 1.1
Trim41Q5NCC3 CT025602.2-201ENSMUST00000226553 772 ntBASIC21.93■■□□□ 1.1
Trim41Q5NCC3 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Trim41Q5NCC3 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Trim41Q5NCC3 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Trim41Q5NCC3 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Trim41Q5NCC3 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
Trim41Q5NCC3 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Trim41Q5NCC3 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC21.93■■□□□ 1.1
Trim41Q5NCC3 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Trim41Q5NCC3 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Trim41Q5NCC3 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
Trim41Q5NCC3 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Trim41Q5NCC3 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
Trim41Q5NCC3 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC21.92■■□□□ 1.1
Trim41Q5NCC3 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Trim41Q5NCC3 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Trim41Q5NCC3 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Trim41Q5NCC3 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Trim41Q5NCC3 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC21.92■■□□□ 1.1
Trim41Q5NCC3 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC21.92■■□□□ 1.1
Trim41Q5NCC3 Gm6963-201ENSMUST00000147879 379 ntBASIC21.92■■□□□ 1.1
Trim41Q5NCC3 Crnde-207ENSMUST00000180102 732 ntTSL 3 BASIC21.92■■□□□ 1.1
Trim41Q5NCC3 Mir124-2hg-207ENSMUST00000189868 535 ntTSL 2 BASIC21.92■■□□□ 1.1
Trim41Q5NCC3 Rprl1-202ENSMUST00000198476 238 ntBASIC21.92■■□□□ 1.1
Trim41Q5NCC3 Gm8913-201ENSMUST00000209491 641 ntBASIC21.92■■□□□ 1.1
Trim41Q5NCC3 Gm13522-202ENSMUST00000209682 997 ntTSL 5 BASIC21.92■■□□□ 1.1
Trim41Q5NCC3 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC21.92■■□□□ 1.1
Trim41Q5NCC3 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC21.92■■□□□ 1.1
Trim41Q5NCC3 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Trim41Q5NCC3 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Trim41Q5NCC3 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
Trim41Q5NCC3 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Trim41Q5NCC3 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
Trim41Q5NCC3 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Trim41Q5NCC3 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Trim41Q5NCC3 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC21.92■■□□□ 1.1
Trim41Q5NCC3 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Trim41Q5NCC3 AC122197.2-201ENSMUST00000219196 1635 ntBASIC21.91■■□□□ 1.1
Trim41Q5NCC3 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Trim41Q5NCC3 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Trim41Q5NCC3 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Trim41Q5NCC3 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
Trim41Q5NCC3 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
Trim41Q5NCC3 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Trim41Q5NCC3 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
Trim41Q5NCC3 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
Trim41Q5NCC3 Pcnp-203ENSMUST00000119981 901 ntTSL 3 BASIC21.91■■□□□ 1.1
Trim41Q5NCC3 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC21.91■■□□□ 1.1
Trim41Q5NCC3 1810021B22Rik-201ENSMUST00000150364 652 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Trim41Q5NCC3 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
Trim41Q5NCC3 Gm3793-201ENSMUST00000204973 672 ntBASIC21.91■■□□□ 1.1
Trim41Q5NCC3 Gm45338-204ENSMUST00000210658 1105 ntTSL 5 BASIC21.91■■□□□ 1.1
Trim41Q5NCC3 Gm6145-204ENSMUST00000210902 1266 ntTSL 5 BASIC21.91■■□□□ 1.1
Trim41Q5NCC3 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Trim41Q5NCC3 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Trim41Q5NCC3 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Trim41Q5NCC3 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC21.91■■□□□ 1.1
Trim41Q5NCC3 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Trim41Q5NCC3 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Trim41Q5NCC3 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Trim41Q5NCC3 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Trim41Q5NCC3 AC137842.1-201ENSMUST00000227896 2064 ntBASIC21.91■■□□□ 1.1
Trim41Q5NCC3 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Trim41Q5NCC3 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Trim41Q5NCC3 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Trim41Q5NCC3 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms