Protein–RNA interactions for Protein: Q3UP44

Nhlrc4, NHL-repeat-containing protein 4, mousemouse

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nhlrc4Q3UP44 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Nhlrc4Q3UP44 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Nhlrc4Q3UP44 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Nhlrc4Q3UP44 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Nhlrc4Q3UP44 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC11.6□□□□□ -0.55
Nhlrc4Q3UP44 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Nhlrc4Q3UP44 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Nhlrc4Q3UP44 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Nhlrc4Q3UP44 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Nhlrc4Q3UP44 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC11.59□□□□□ -0.55
Nhlrc4Q3UP44 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Nhlrc4Q3UP44 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC11.59□□□□□ -0.55
Nhlrc4Q3UP44 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Nhlrc4Q3UP44 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Nhlrc4Q3UP44 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Nhlrc4Q3UP44 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Nhlrc4Q3UP44 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Nhlrc4Q3UP44 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Nhlrc4Q3UP44 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Nhlrc4Q3UP44 Gm8908-201ENSMUST00000121633 1024 ntBASIC11.59□□□□□ -0.55
Nhlrc4Q3UP44 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC11.59□□□□□ -0.55
Nhlrc4Q3UP44 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC11.59□□□□□ -0.55
Nhlrc4Q3UP44 Gm27501-201ENSMUST00000183599 107 ntBASIC11.59□□□□□ -0.55
Nhlrc4Q3UP44 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Nhlrc4Q3UP44 Gm10608-202ENSMUST00000213924 676 ntBASIC11.59□□□□□ -0.55
Nhlrc4Q3UP44 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC11.59□□□□□ -0.55
Nhlrc4Q3UP44 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Nhlrc4Q3UP44 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Nhlrc4Q3UP44 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Nhlrc4Q3UP44 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Nhlrc4Q3UP44 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Nhlrc4Q3UP44 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Nhlrc4Q3UP44 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Nhlrc4Q3UP44 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Nhlrc4Q3UP44 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC11.59□□□□□ -0.55
Nhlrc4Q3UP44 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Nhlrc4Q3UP44 Gm37737-201ENSMUST00000195013 1638 ntBASIC11.59□□□□□ -0.55
Nhlrc4Q3UP44 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Nhlrc4Q3UP44 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Nhlrc4Q3UP44 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Nhlrc4Q3UP44 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Nhlrc4Q3UP44 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Nhlrc4Q3UP44 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Nhlrc4Q3UP44 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Nhlrc4Q3UP44 Gm4366-201ENSMUST00000201488 1342 ntBASIC11.59□□□□□ -0.55
Nhlrc4Q3UP44 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Nhlrc4Q3UP44 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Nhlrc4Q3UP44 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Nhlrc4Q3UP44 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC11.58□□□□□ -0.55
Nhlrc4Q3UP44 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Nhlrc4Q3UP44 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Nhlrc4Q3UP44 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC11.58□□□□□ -0.56
Nhlrc4Q3UP44 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Nhlrc4Q3UP44 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Nhlrc4Q3UP44 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Nhlrc4Q3UP44 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Nhlrc4Q3UP44 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Nhlrc4Q3UP44 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC11.58□□□□□ -0.56
Nhlrc4Q3UP44 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Nhlrc4Q3UP44 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Nhlrc4Q3UP44 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Nhlrc4Q3UP44 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC11.58□□□□□ -0.56
Nhlrc4Q3UP44 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC11.58□□□□□ -0.56
Nhlrc4Q3UP44 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Nhlrc4Q3UP44 Gm12314-201ENSMUST00000118104 538 ntBASIC11.58□□□□□ -0.56
Nhlrc4Q3UP44 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Nhlrc4Q3UP44 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Nhlrc4Q3UP44 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Nhlrc4Q3UP44 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC11.58□□□□□ -0.56
Nhlrc4Q3UP44 Gm29396-201ENSMUST00000185659 716 ntBASIC11.58□□□□□ -0.56
Nhlrc4Q3UP44 Gm18304-201ENSMUST00000189162 546 ntBASIC11.58□□□□□ -0.56
Nhlrc4Q3UP44 Gm42627-201ENSMUST00000197347 224 ntBASIC11.58□□□□□ -0.56
Nhlrc4Q3UP44 Gm6013-201ENSMUST00000212264 699 ntBASIC11.58□□□□□ -0.56
Nhlrc4Q3UP44 Gm7046-201ENSMUST00000221351 977 ntBASIC11.58□□□□□ -0.56
Nhlrc4Q3UP44 Gm8227-201ENSMUST00000223306 571 ntBASIC11.58□□□□□ -0.56
Nhlrc4Q3UP44 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Nhlrc4Q3UP44 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Nhlrc4Q3UP44 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC11.58□□□□□ -0.56
Nhlrc4Q3UP44 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Nhlrc4Q3UP44 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Nhlrc4Q3UP44 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Nhlrc4Q3UP44 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Nhlrc4Q3UP44 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Nhlrc4Q3UP44 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Nhlrc4Q3UP44 Gm37437-201ENSMUST00000194451 1937 ntBASIC11.58□□□□□ -0.56
Nhlrc4Q3UP44 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Nhlrc4Q3UP44 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Nhlrc4Q3UP44 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC11.58□□□□□ -0.56
Nhlrc4Q3UP44 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Nhlrc4Q3UP44 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Nhlrc4Q3UP44 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Nhlrc4Q3UP44 Gm5780-201ENSMUST00000217774 1834 ntBASIC11.58□□□□□ -0.56
Nhlrc4Q3UP44 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Nhlrc4Q3UP44 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Nhlrc4Q3UP44 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Nhlrc4Q3UP44 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Nhlrc4Q3UP44 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Nhlrc4Q3UP44 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Nhlrc4Q3UP44 Gm19221-201ENSMUST00000221827 1477 ntBASIC11.57□□□□□ -0.56
Nhlrc4Q3UP44 Gm5884-201ENSMUST00000036712 1479 ntBASIC11.57□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 75.9 ms