Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC11.56□□□□□ -0.56
Spg11Q3UHA3 Gm44270-201ENSMUST00000203084 1234 ntBASIC11.56□□□□□ -0.56
Spg11Q3UHA3 Gm45575-201ENSMUST00000210283 548 ntBASIC11.56□□□□□ -0.56
Spg11Q3UHA3 Gm30978-201ENSMUST00000211581 1066 ntTSL 5 BASIC11.56□□□□□ -0.56
Spg11Q3UHA3 Gm45758-201ENSMUST00000212448 1006 ntBASIC11.56□□□□□ -0.56
Spg11Q3UHA3 Gm40910-202ENSMUST00000223077 569 ntTSL 5 BASIC11.56□□□□□ -0.56
Spg11Q3UHA3 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Spg11Q3UHA3 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Spg11Q3UHA3 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Spg11Q3UHA3 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Spg11Q3UHA3 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Spg11Q3UHA3 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Spg11Q3UHA3 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Spg11Q3UHA3 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Spg11Q3UHA3 Gm26783-201ENSMUST00000181197 2377 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Spg11Q3UHA3 Fbxo15-201ENSMUST00000037718 1437 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Spg11Q3UHA3 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC11.56□□□□□ -0.56
Spg11Q3UHA3 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Spg11Q3UHA3 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Spg11Q3UHA3 AC164107.1-201ENSMUST00000227730 2161 ntBASIC11.56□□□□□ -0.56
Spg11Q3UHA3 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC11.56□□□□□ -0.56
Spg11Q3UHA3 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Spg11Q3UHA3 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
Spg11Q3UHA3 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Spg11Q3UHA3 Gm829-201ENSMUST00000123741 465 ntTSL 3 BASIC11.56□□□□□ -0.56
Spg11Q3UHA3 Gm22846-201ENSMUST00000157706 270 ntBASIC11.56□□□□□ -0.56
Spg11Q3UHA3 Gm2345-201ENSMUST00000193451 589 ntBASIC11.56□□□□□ -0.56
Spg11Q3UHA3 Gm42816-201ENSMUST00000198433 325 ntBASIC11.56□□□□□ -0.56
Spg11Q3UHA3 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Spg11Q3UHA3 Gm43697-201ENSMUST00000199637 2581 ntBASIC11.56□□□□□ -0.56
Spg11Q3UHA3 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Spg11Q3UHA3 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC11.56□□□□□ -0.56
Spg11Q3UHA3 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Spg11Q3UHA3 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Spg11Q3UHA3 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Spg11Q3UHA3 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Spg11Q3UHA3 Gm12453-201ENSMUST00000121981 331 ntBASIC11.55□□□□□ -0.56
Spg11Q3UHA3 Slfn5os-201ENSMUST00000127074 574 ntTSL 2 BASIC11.55□□□□□ -0.56
Spg11Q3UHA3 Gm15524-201ENSMUST00000159874 463 ntTSL 3 BASIC11.55□□□□□ -0.56
Spg11Q3UHA3 6530401F13Rik-201ENSMUST00000166971 1090 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Spg11Q3UHA3 Ighv1-76-201ENSMUST00000169155 294 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
Spg11Q3UHA3 Ighv1-62-1-202ENSMUST00000171270 90 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
Spg11Q3UHA3 Nlrp5-ps-202ENSMUST00000173220 1294 ntBASIC11.55□□□□□ -0.56
Spg11Q3UHA3 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Spg11Q3UHA3 AC121357.1-201ENSMUST00000227365 608 ntBASIC11.55□□□□□ -0.56
Spg11Q3UHA3 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Spg11Q3UHA3 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Spg11Q3UHA3 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Spg11Q3UHA3 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Spg11Q3UHA3 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Spg11Q3UHA3 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Spg11Q3UHA3 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Spg11Q3UHA3 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Spg11Q3UHA3 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Spg11Q3UHA3 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Spg11Q3UHA3 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Spg11Q3UHA3 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Spg11Q3UHA3 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Spg11Q3UHA3 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Spg11Q3UHA3 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC11.55□□□□□ -0.56
Spg11Q3UHA3 Gm3415-201ENSMUST00000110595 924 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Spg11Q3UHA3 Gm44421-201ENSMUST00000205064 1221 ntBASIC11.55□□□□□ -0.56
Spg11Q3UHA3 Gm45592-201ENSMUST00000209605 1043 ntBASIC11.55□□□□□ -0.56
Spg11Q3UHA3 CT030652.1-201ENSMUST00000227377 1235 ntBASIC11.55□□□□□ -0.56
Spg11Q3UHA3 Nkg7-201ENSMUST00000070518 881 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Spg11Q3UHA3 Gm3402-202ENSMUST00000077133 924 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Spg11Q3UHA3 Gm9856-201ENSMUST00000217077 2578 ntBASIC11.55□□□□□ -0.56
Spg11Q3UHA3 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Spg11Q3UHA3 Uqcrc2-201ENSMUST00000033176 1896 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Spg11Q3UHA3 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC11.54□□□□□ -0.56
Spg11Q3UHA3 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Spg11Q3UHA3 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Spg11Q3UHA3 Drd3-201ENSMUST00000023390 1455 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Spg11Q3UHA3 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Spg11Q3UHA3 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Spg11Q3UHA3 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC11.54□□□□□ -0.56
Spg11Q3UHA3 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Spg11Q3UHA3 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Spg11Q3UHA3 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Spg11Q3UHA3 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Spg11Q3UHA3 Art5-202ENSMUST00000106934 843 ntTSL 5 BASIC11.54□□□□□ -0.56
Spg11Q3UHA3 Gm14921-201ENSMUST00000118643 908 ntBASIC11.54□□□□□ -0.56
Spg11Q3UHA3 Gm20420-201ENSMUST00000173178 639 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Spg11Q3UHA3 Gm26134-201ENSMUST00000178484 110 ntBASIC11.54□□□□□ -0.56
Spg11Q3UHA3 Gm13272-201ENSMUST00000179425 811 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
Spg11Q3UHA3 Gm18561-201ENSMUST00000206027 804 ntBASIC11.54□□□□□ -0.56
Spg11Q3UHA3 Lxn-201ENSMUST00000058981 1112 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Spg11Q3UHA3 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Spg11Q3UHA3 Brsk1-204ENSMUST00000205666 1398 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Spg11Q3UHA3 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Spg11Q3UHA3 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Spg11Q3UHA3 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Spg11Q3UHA3 Tia1-211ENSMUST00000130967 1445 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Spg11Q3UHA3 AC159810.1-201ENSMUST00000214838 1480 ntBASIC11.54□□□□□ -0.56
Spg11Q3UHA3 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Spg11Q3UHA3 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Spg11Q3UHA3 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Spg11Q3UHA3 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Spg11Q3UHA3 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC11.54□□□□□ -0.56
Spg11Q3UHA3 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 60.1 ms