Protein–RNA interactions for Protein: Q3TCX3

Khdc4, KH homology domain-containing protein 4, mousemouse

Predictions only

Length 612 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Khdc4Q3TCX3 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Khdc4Q3TCX3 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Khdc4Q3TCX3 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Khdc4Q3TCX3 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Khdc4Q3TCX3 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Khdc4Q3TCX3 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC12.06□□□□□ -0.48
Khdc4Q3TCX3 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC12.06□□□□□ -0.48
Khdc4Q3TCX3 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Khdc4Q3TCX3 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Khdc4Q3TCX3 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Khdc4Q3TCX3 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
Khdc4Q3TCX3 Gm37259-201ENSMUST00000193903 849 ntBASIC12.06□□□□□ -0.48
Khdc4Q3TCX3 Gm37466-201ENSMUST00000195692 652 ntBASIC12.06□□□□□ -0.48
Khdc4Q3TCX3 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC12.06□□□□□ -0.48
Khdc4Q3TCX3 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Khdc4Q3TCX3 Gm18584-201ENSMUST00000203098 964 ntBASIC12.06□□□□□ -0.48
Khdc4Q3TCX3 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC12.06□□□□□ -0.48
Khdc4Q3TCX3 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Khdc4Q3TCX3 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Khdc4Q3TCX3 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Khdc4Q3TCX3 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Khdc4Q3TCX3 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Khdc4Q3TCX3 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Khdc4Q3TCX3 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Khdc4Q3TCX3 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Khdc4Q3TCX3 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Khdc4Q3TCX3 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Khdc4Q3TCX3 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Khdc4Q3TCX3 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Khdc4Q3TCX3 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Khdc4Q3TCX3 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Khdc4Q3TCX3 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Khdc4Q3TCX3 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Khdc4Q3TCX3 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC12.06□□□□□ -0.48
Khdc4Q3TCX3 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC12.06□□□□□ -0.48
Khdc4Q3TCX3 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Khdc4Q3TCX3 Igfn1-203ENSMUST00000166193 8989 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Khdc4Q3TCX3 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Khdc4Q3TCX3 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Khdc4Q3TCX3 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC12.05□□□□□ -0.48
Khdc4Q3TCX3 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Khdc4Q3TCX3 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Khdc4Q3TCX3 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Khdc4Q3TCX3 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Khdc4Q3TCX3 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Khdc4Q3TCX3 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Khdc4Q3TCX3 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Khdc4Q3TCX3 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Khdc4Q3TCX3 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC12.05□□□□□ -0.48
Khdc4Q3TCX3 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Khdc4Q3TCX3 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Khdc4Q3TCX3 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Khdc4Q3TCX3 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC12.05□□□□□ -0.48
Khdc4Q3TCX3 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Khdc4Q3TCX3 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Khdc4Q3TCX3 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC12.05□□□□□ -0.48
Khdc4Q3TCX3 Gm17376-201ENSMUST00000166016 84 ntBASIC12.05□□□□□ -0.48
Khdc4Q3TCX3 Gm17208-201ENSMUST00000168388 535 ntBASIC12.05□□□□□ -0.48
Khdc4Q3TCX3 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC12.05□□□□□ -0.48
Khdc4Q3TCX3 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC12.05□□□□□ -0.48
Khdc4Q3TCX3 Mir3102-201ENSMUST00000175555 104 ntBASIC12.05□□□□□ -0.48
Khdc4Q3TCX3 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Khdc4Q3TCX3 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC12.05□□□□□ -0.48
Khdc4Q3TCX3 Gm6082-201ENSMUST00000215204 454 ntBASIC12.05□□□□□ -0.48
Khdc4Q3TCX3 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Khdc4Q3TCX3 CT573034.1-201ENSMUST00000222983 313 ntBASIC12.05□□□□□ -0.48
Khdc4Q3TCX3 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Khdc4Q3TCX3 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Khdc4Q3TCX3 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Khdc4Q3TCX3 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Khdc4Q3TCX3 Mir433-201ENSMUST00000093564 124 ntBASIC12.05□□□□□ -0.48
Khdc4Q3TCX3 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Khdc4Q3TCX3 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Khdc4Q3TCX3 Dcc-202ENSMUST00000114943 5219 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Khdc4Q3TCX3 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Khdc4Q3TCX3 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC12.05□□□□□ -0.48
Khdc4Q3TCX3 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC12.05□□□□□ -0.48
Khdc4Q3TCX3 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC12.05□□□□□ -0.48
Khdc4Q3TCX3 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Khdc4Q3TCX3 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
Khdc4Q3TCX3 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC12.05□□□□□ -0.48
Khdc4Q3TCX3 Gm44851-201ENSMUST00000205735 2309 ntBASIC12.05□□□□□ -0.48
Khdc4Q3TCX3 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Khdc4Q3TCX3 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC12.05□□□□□ -0.48
Khdc4Q3TCX3 AC151895.1-201ENSMUST00000219025 1742 ntBASIC12.05□□□□□ -0.48
Khdc4Q3TCX3 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Khdc4Q3TCX3 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Khdc4Q3TCX3 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Khdc4Q3TCX3 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Khdc4Q3TCX3 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Khdc4Q3TCX3 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Khdc4Q3TCX3 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Khdc4Q3TCX3 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC12.05□□□□□ -0.48
Khdc4Q3TCX3 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Khdc4Q3TCX3 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Khdc4Q3TCX3 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Khdc4Q3TCX3 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC12.05□□□□□ -0.48
Khdc4Q3TCX3 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Khdc4Q3TCX3 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Khdc4Q3TCX3 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms