Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 Edaradd-201ENSMUST00000179308 6668 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trim63Q38HM4 Znrf3-203ENSMUST00000172492 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trim63Q38HM4 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trim63Q38HM4 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Trim63Q38HM4 Usp2-203ENSMUST00000114830 2122 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Trim63Q38HM4 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trim63Q38HM4 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC10.35□□□□□ -0.75
Trim63Q38HM4 Gm25016-201ENSMUST00000158399 131 ntBASIC10.35□□□□□ -0.75
Trim63Q38HM4 Gm17808-201ENSMUST00000200859 894 ntBASIC10.35□□□□□ -0.75
Trim63Q38HM4 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Trim63Q38HM4 Gm45572-201ENSMUST00000211774 750 ntTSL 5 BASIC10.35□□□□□ -0.75
Trim63Q38HM4 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Trim63Q38HM4 Gm18934-201ENSMUST00000216671 1044 ntBASIC10.35□□□□□ -0.75
Trim63Q38HM4 Gm18027-201ENSMUST00000218947 619 ntBASIC10.35□□□□□ -0.75
Trim63Q38HM4 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC10.35□□□□□ -0.75
Trim63Q38HM4 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
Trim63Q38HM4 Vezt-202ENSMUST00000118077 2223 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trim63Q38HM4 Trpm2-203ENSMUST00000105401 7274 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trim63Q38HM4 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trim63Q38HM4 Tom1l2-206ENSMUST00000102683 4999 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trim63Q38HM4 Jmjd4-202ENSMUST00000108777 4351 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trim63Q38HM4 Nol3-201ENSMUST00000014920 3176 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trim63Q38HM4 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
Trim63Q38HM4 Zfp384-206ENSMUST00000112425 2691 ntTSL 5 BASIC10.35□□□□□ -0.75
Trim63Q38HM4 Tie1-201ENSMUST00000047421 4091 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trim63Q38HM4 Gm45187-201ENSMUST00000207697 2760 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Trim63Q38HM4 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trim63Q38HM4 Cd163-201ENSMUST00000032234 4404 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trim63Q38HM4 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trim63Q38HM4 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Trim63Q38HM4 Gm31938-201ENSMUST00000218081 1818 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Trim63Q38HM4 Ank3-204ENSMUST00000092432 5832 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
Trim63Q38HM4 Faim2-201ENSMUST00000023750 4520 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trim63Q38HM4 Slf2-201ENSMUST00000096053 6880 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trim63Q38HM4 Aoc2-201ENSMUST00000041095 2543 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trim63Q38HM4 Akap12-202ENSMUST00000215696 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trim63Q38HM4 Thsd7b-202ENSMUST00000073527 6213 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trim63Q38HM4 Plcd4-204ENSMUST00000113747 2720 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Trim63Q38HM4 Hsd3b1-201ENSMUST00000029465 1663 ntAPPRIS P1 TSL 2 BASIC10.34□□□□□ -0.75
Trim63Q38HM4 Sox13-203ENSMUST00000144386 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trim63Q38HM4 6430573F11Rik-203ENSMUST00000147525 5820 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trim63Q38HM4 Gm11685-201ENSMUST00000141559 1332 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Trim63Q38HM4 Fam210b-201ENSMUST00000028995 3617 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trim63Q38HM4 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trim63Q38HM4 Crispld2-202ENSMUST00000108972 2928 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trim63Q38HM4 Hmbox1-202ENSMUST00000067843 2931 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trim63Q38HM4 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trim63Q38HM4 Fnbp1l-201ENSMUST00000162409 5198 ntTSL 5 BASIC10.34□□□□□ -0.75
Trim63Q38HM4 Gne-201ENSMUST00000030201 5384 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Trim63Q38HM4 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC10.34□□□□□ -0.75
Trim63Q38HM4 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC10.34□□□□□ -0.75
Trim63Q38HM4 Rnf20-210ENSMUST00000167496 4312 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trim63Q38HM4 Eng-201ENSMUST00000009705 3422 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trim63Q38HM4 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Trim63Q38HM4 AC154314.2-201ENSMUST00000223677 3502 ntBASIC10.34□□□□□ -0.75
Trim63Q38HM4 Atp1a3-205ENSMUST00000196684 3642 ntTSL 5 BASIC10.34□□□□□ -0.75
Trim63Q38HM4 Cyp11b1-201ENSMUST00000170259 3165 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trim63Q38HM4 Cdh15-201ENSMUST00000034443 3251 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trim63Q38HM4 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
Trim63Q38HM4 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC10.34□□□□□ -0.75
Trim63Q38HM4 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC10.34□□□□□ -0.75
Trim63Q38HM4 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Trim63Q38HM4 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC10.34□□□□□ -0.75
Trim63Q38HM4 Gm15565-201ENSMUST00000118890 427 ntBASIC10.34□□□□□ -0.75
Trim63Q38HM4 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC10.34□□□□□ -0.75
Trim63Q38HM4 Gm16026-204ENSMUST00000162652 683 ntBASIC10.34□□□□□ -0.75
Trim63Q38HM4 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
Trim63Q38HM4 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Trim63Q38HM4 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Trim63Q38HM4 Fmnl1-207ENSMUST00000218163 3824 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
Trim63Q38HM4 AC121598.1-201ENSMUST00000228224 1019 ntBASIC10.34□□□□□ -0.75
Trim63Q38HM4 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trim63Q38HM4 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trim63Q38HM4 Fmnl1-202ENSMUST00000042286 3806 ntAPPRIS P4 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trim63Q38HM4 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC10.34□□□□□ -0.75
Trim63Q38HM4 Dip2a-205ENSMUST00000160048 6551 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
Trim63Q38HM4 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Trim63Q38HM4 Epb41l5-202ENSMUST00000052404 6442 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Trim63Q38HM4 Mecomos-201ENSMUST00000125611 5510 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Trim63Q38HM4 Myo9a-206ENSMUST00000136740 12252 ntAPPRIS P2 TSL 5 BASIC10.34□□□□□ -0.75
Trim63Q38HM4 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trim63Q38HM4 Ccdc62-201ENSMUST00000094320 3924 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
Trim63Q38HM4 Icam1-201ENSMUST00000086399 2535 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trim63Q38HM4 Gaa-201ENSMUST00000026666 3363 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trim63Q38HM4 Tacc2-205ENSMUST00000207282 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Trim63Q38HM4 Corin-207ENSMUST00000177290 2943 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
Trim63Q38HM4 Tm9sf1-202ENSMUST00000120041 2164 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
Trim63Q38HM4 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Trim63Q38HM4 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trim63Q38HM4 Tmcc2-201ENSMUST00000045473 3410 ntAPPRIS P3 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trim63Q38HM4 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trim63Q38HM4 Gimap8-202ENSMUST00000203083 2579 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trim63Q38HM4 Tbc1d14-204ENSMUST00000130417 2665 ntTSL 5 BASIC10.33□□□□□ -0.76
Trim63Q38HM4 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC10.33□□□□□ -0.76
Trim63Q38HM4 Rad54l-202ENSMUST00000102705 2780 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trim63Q38HM4 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trim63Q38HM4 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC10.33□□□□□ -0.76
Trim63Q38HM4 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trim63Q38HM4 Cklf-202ENSMUST00000098464 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Trim63Q38HM4 Klhl18-205ENSMUST00000198400 4638 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 51.6 ms