Protein–RNA interactions for Protein: Q08624

Hoxc4, Homeobox protein Hox-C4, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc4Q08624 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC12.13□□□□□ -0.47
Hoxc4Q08624 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Hoxc4Q08624 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC12.13□□□□□ -0.47
Hoxc4Q08624 Gm12286-201ENSMUST00000119246 1002 ntBASIC12.13□□□□□ -0.47
Hoxc4Q08624 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Hoxc4Q08624 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC12.13□□□□□ -0.47
Hoxc4Q08624 Gm2260-201ENSMUST00000184965 657 ntBASIC12.13□□□□□ -0.47
Hoxc4Q08624 Gm37312-201ENSMUST00000195753 685 ntTSL 5 BASIC12.13□□□□□ -0.47
Hoxc4Q08624 Fxyd1-217ENSMUST00000206860 594 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Hoxc4Q08624 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC12.13□□□□□ -0.47
Hoxc4Q08624 Gm19994-201ENSMUST00000217086 586 ntBASIC12.13□□□□□ -0.47
Hoxc4Q08624 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Hoxc4Q08624 Blvrb-201ENSMUST00000037399 1028 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Hoxc4Q08624 Gm9996-201ENSMUST00000070359 913 ntBASIC12.13□□□□□ -0.47
Hoxc4Q08624 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Hoxc4Q08624 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Hoxc4Q08624 Gm45342-201ENSMUST00000210903 1363 ntBASIC12.13□□□□□ -0.47
Hoxc4Q08624 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Hoxc4Q08624 Grk6-205ENSMUST00000224653 2976 ntBASIC12.13□□□□□ -0.47
Hoxc4Q08624 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Hoxc4Q08624 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Hoxc4Q08624 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Hoxc4Q08624 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Hoxc4Q08624 Gm13142-201ENSMUST00000117213 1453 ntBASIC12.13□□□□□ -0.47
Hoxc4Q08624 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Hoxc4Q08624 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Hoxc4Q08624 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Hoxc4Q08624 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Hoxc4Q08624 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Hoxc4Q08624 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Hoxc4Q08624 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Hoxc4Q08624 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Hoxc4Q08624 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Hoxc4Q08624 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Hoxc4Q08624 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Hoxc4Q08624 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Hoxc4Q08624 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Hoxc4Q08624 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Hoxc4Q08624 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Hoxc4Q08624 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Hoxc4Q08624 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Hoxc4Q08624 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Hoxc4Q08624 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC12.12□□□□□ -0.47
Hoxc4Q08624 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Hoxc4Q08624 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC12.12□□□□□ -0.47
Hoxc4Q08624 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Hoxc4Q08624 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Hoxc4Q08624 Gm24934-201ENSMUST00000103764 111 ntBASIC12.12□□□□□ -0.47
Hoxc4Q08624 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Hoxc4Q08624 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC12.12□□□□□ -0.47
Hoxc4Q08624 Gm9083-201ENSMUST00000120423 819 ntBASIC12.12□□□□□ -0.47
Hoxc4Q08624 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Hoxc4Q08624 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Hoxc4Q08624 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Hoxc4Q08624 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Hoxc4Q08624 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
Hoxc4Q08624 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Hoxc4Q08624 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Hoxc4Q08624 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Hoxc4Q08624 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC12.12□□□□□ -0.47
Hoxc4Q08624 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC12.12□□□□□ -0.47
Hoxc4Q08624 AC154252.2-201ENSMUST00000223593 767 ntBASIC12.12□□□□□ -0.47
Hoxc4Q08624 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Hoxc4Q08624 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Hoxc4Q08624 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Hoxc4Q08624 Cryba2-201ENSMUST00000006721 720 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Hoxc4Q08624 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC12.12□□□□□ -0.47
Hoxc4Q08624 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Hoxc4Q08624 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Hoxc4Q08624 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Hoxc4Q08624 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Hoxc4Q08624 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Hoxc4Q08624 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Hoxc4Q08624 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Hoxc4Q08624 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC12.12□□□□□ -0.47
Hoxc4Q08624 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Hoxc4Q08624 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Hoxc4Q08624 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Hoxc4Q08624 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Hoxc4Q08624 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Hoxc4Q08624 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Hoxc4Q08624 Zkscan3-207ENSMUST00000223831 2101 ntBASIC12.11□□□□□ -0.47
Hoxc4Q08624 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Hoxc4Q08624 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC12.11□□□□□ -0.47
Hoxc4Q08624 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Hoxc4Q08624 Gm43364-201ENSMUST00000196046 3274 ntBASIC12.11□□□□□ -0.47
Hoxc4Q08624 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Hoxc4Q08624 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Hoxc4Q08624 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Hoxc4Q08624 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Hoxc4Q08624 Gm11439-201ENSMUST00000118598 409 ntBASIC12.11□□□□□ -0.47
Hoxc4Q08624 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Hoxc4Q08624 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC12.11□□□□□ -0.47
Hoxc4Q08624 Gm24990-201ENSMUST00000157406 323 ntBASIC12.11□□□□□ -0.47
Hoxc4Q08624 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Hoxc4Q08624 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC12.11□□□□□ -0.47
Hoxc4Q08624 Gstp-ps-201ENSMUST00000195526 631 ntBASIC12.11□□□□□ -0.47
Hoxc4Q08624 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC12.11□□□□□ -0.47
Hoxc4Q08624 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC12.11□□□□□ -0.47
Hoxc4Q08624 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC12.11□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms