Protein–RNA interactions for Protein: Q08423

Tff1, Trefoil factor 1, mousemouse

Predictions only

Length 87 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tff1Q08423 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Tff1Q08423 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Tff1Q08423 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
Tff1Q08423 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Tff1Q08423 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
Tff1Q08423 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Tff1Q08423 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC10.52□□□□□ -0.73
Tff1Q08423 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Tff1Q08423 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC10.51□□□□□ -0.73
Tff1Q08423 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
Tff1Q08423 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Tff1Q08423 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Tff1Q08423 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Tff1Q08423 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC10.51□□□□□ -0.73
Tff1Q08423 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
Tff1Q08423 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC10.51□□□□□ -0.73
Tff1Q08423 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Tff1Q08423 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Tff1Q08423 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Tff1Q08423 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Tff1Q08423 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Tff1Q08423 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Tff1Q08423 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Tff1Q08423 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC10.51□□□□□ -0.73
Tff1Q08423 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC10.51□□□□□ -0.73
Tff1Q08423 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Tff1Q08423 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC10.51□□□□□ -0.73
Tff1Q08423 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Tff1Q08423 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC10.51□□□□□ -0.73
Tff1Q08423 Gm20033-203ENSMUST00000180912 796 ntTSL 5 BASIC10.51□□□□□ -0.73
Tff1Q08423 Gm29649-201ENSMUST00000185649 419 ntBASIC10.51□□□□□ -0.73
Tff1Q08423 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC10.51□□□□□ -0.73
Tff1Q08423 Gm7287-201ENSMUST00000205267 602 ntBASIC10.51□□□□□ -0.73
Tff1Q08423 Gm8463-201ENSMUST00000208573 613 ntBASIC10.51□□□□□ -0.73
Tff1Q08423 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC10.51□□□□□ -0.73
Tff1Q08423 Gm6458-201ENSMUST00000211573 635 ntBASIC10.51□□□□□ -0.73
Tff1Q08423 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC10.51□□□□□ -0.73
Tff1Q08423 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC10.51□□□□□ -0.73
Tff1Q08423 AC122459.1-201ENSMUST00000228373 885 ntBASIC10.51□□□□□ -0.73
Tff1Q08423 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Tff1Q08423 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Tff1Q08423 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Tff1Q08423 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Tff1Q08423 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Tff1Q08423 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC10.51□□□□□ -0.73
Tff1Q08423 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Tff1Q08423 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
Tff1Q08423 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Tff1Q08423 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Tff1Q08423 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Tff1Q08423 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Tff1Q08423 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
Tff1Q08423 Gm42840-201ENSMUST00000200303 2251 ntBASIC10.51□□□□□ -0.73
Tff1Q08423 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Tff1Q08423 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC10.51□□□□□ -0.73
Tff1Q08423 AL645783.1-201ENSMUST00000221416 1832 ntBASIC10.51□□□□□ -0.73
Tff1Q08423 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC10.51□□□□□ -0.73
Tff1Q08423 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Tff1Q08423 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Tff1Q08423 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Tff1Q08423 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Tff1Q08423 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Tff1Q08423 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Tff1Q08423 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Tff1Q08423 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Tff1Q08423 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC10.5□□□□□ -0.73
Tff1Q08423 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Tff1Q08423 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Tff1Q08423 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC10.5□□□□□ -0.73
Tff1Q08423 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Tff1Q08423 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Tff1Q08423 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC10.5□□□□□ -0.73
Tff1Q08423 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Tff1Q08423 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Tff1Q08423 AC123834.1-201ENSMUST00000225346 2043 ntBASIC10.5□□□□□ -0.73
Tff1Q08423 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Tff1Q08423 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Tff1Q08423 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Tff1Q08423 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Tff1Q08423 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Tff1Q08423 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
Tff1Q08423 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Tff1Q08423 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
Tff1Q08423 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC10.5□□□□□ -0.73
Tff1Q08423 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Tff1Q08423 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC10.5□□□□□ -0.73
Tff1Q08423 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC10.5□□□□□ -0.73
Tff1Q08423 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Tff1Q08423 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Tff1Q08423 Gm5370-201ENSMUST00000187187 574 ntBASIC10.5□□□□□ -0.73
Tff1Q08423 Gm7561-201ENSMUST00000211203 886 ntBASIC10.5□□□□□ -0.73
Tff1Q08423 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
Tff1Q08423 Gm7172-201ENSMUST00000218047 1152 ntBASIC10.5□□□□□ -0.73
Tff1Q08423 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC10.5□□□□□ -0.73
Tff1Q08423 CT009713.10-202ENSMUST00000225734 696 ntBASIC10.5□□□□□ -0.73
Tff1Q08423 AC154276.1-201ENSMUST00000228874 1299 ntBASIC10.5□□□□□ -0.73
Tff1Q08423 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC10.5□□□□□ -0.73
Tff1Q08423 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Tff1Q08423 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Tff1Q08423 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC10.5□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 101.5 ms